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Carrie Nicora
Carrie Nicora
Verified email at pnnl.gov
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Year
Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea
SM Sowell, LJ Wilhelm, AD Norbeck, MS Lipton, CD Nicora, DF Barofsky, ...
The ISME journal 3 (1), 93-105, 2009
3372009
Genome-centric view of carbon processing in thawing permafrost
BJ Woodcroft, CM Singleton, JA Boyd, PN Evans, JB Emerson, ...
Nature 560 (7716), 49-54, 2018
3232018
Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II
TS Ream, JR Haag, AT Wierzbicki, CD Nicora, AD Norbeck, JK Zhu, ...
Molecular cell 33 (2), 192-203, 2009
2872009
In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing
JR Haag, TS Ream, M Marasco, CD Nicora, AD Norbeck, L Pasa-Tolic, ...
Molecular cell 48 (5), 811-818, 2012
2252012
MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape
VD Menachery, A Schäfer, KE Burnum-Johnson, HD Mitchell, AJ Eisfeld, ...
Proceedings of the National Academy of Sciences 115 (5), E1012-E1021, 2018
1982018
Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer
KC Wrighton, CJ Castelle, MJ Wilkins, LA Hug, I Sharon, BC Thomas, ...
The ISME journal 8 (7), 1452-1463, 2014
1772014
MPLEx: a robust and universal protocol for single-sample integrative proteomic, metabolomic, and lipidomic analyses
ES Nakayasu, CD Nicora, AC Sims, KE Burnum-Johnson, YM Kim, ...
MSystems 1 (3), 10.1128/msystems. 00043-16, 2016
168*2016
Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
FO Aylward, KE Burnum, JJ Scott, G Suen, SG Tringe, SM Adams, ...
The ISME journal 6 (9), 1688-1701, 2012
1512012
Proteogenomic Monitoring of Geobacter Physiology during Stimulated Uranium Bioremediation
MJ Wilkins, NC VerBerkmoes, KH Williams, SJ Callister, PJ Mouser, ...
Applied and environmental microbiology 75 (20), 6591-6599, 2009
1482009
Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway
T Shi, M Niepel, JE McDermott, Y Gao, CD Nicora, WB Chrisler, ...
Science Signaling 9 (436), rs6-rs6, 2016
1372016
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem
LM Solden, AE Naas, S Roux, RA Daly, WB Collins, CD Nicora, ...
Nature microbiology 3 (11), 1274-1284, 2018
1342018
Phosphoproteome profiling of human skin fibroblast cells in response to low-and high-dose irradiation
F Yang, DL Stenoien, EF Strittmatter, J Wang, L Ding, MS Lipton, ...
Journal of proteome research 5 (5), 1252-1260, 2006
1342006
Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1
KM DeAngelis, D Sharma, R Varney, BA Simmons, NG Isern, LM Markillie, ...
Frontiers in Microbiology 4, 59376, 2013
1322013
Multiomics resolution of molecular events during a day in the life of Chlamydomonas
D Strenkert, S Schmollinger, SD Gallaher, PA Salomé, SO Purvine, ...
Proceedings of the National Academy of Sciences 116 (6), 2374-2383, 2019
1282019
The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol
J Sun, JD Todd, JC Thrash, Y Qian, MC Qian, B Temperton, J Guo, ...
Nature microbiology 1 (8), 1-5, 2016
1282016
New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11
LM Solden, DW Hoyt, WB Collins, JE Plank, RA Daly, E Hildebrand, ...
The ISME journal 11 (3), 691-703, 2017
1202017
Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens
FO Aylward, KE Burnum-Johnson, SG Tringe, C Teiling, DM Tremmel, ...
Applied and Environmental Microbiology 79 (12), 3770-3778, 2013
1152013
Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis
JF Challacombe, CN Hesse, LM Bramer, LA McCue, M Lipton, S Purvine, ...
BMC genomics 20, 1-27, 2019
1122019
Simple sodium dodecyl sulfate-assisted sample preparation method for LC-MS-based proteomics applications
JY Zhou, GP Dann, T Shi, L Wang, X Gao, D Su, CD Nicora, AK Shukla, ...
Analytical chemistry 84 (6), 2862-2867, 2012
992012
Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data
AA Aksenov, I Laponogov, Z Zhang, SLF Doran, I Belluomo, D Veselkov, ...
Nature biotechnology 39 (2), 169-173, 2021
922021
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