Sandeep Kumar Dhanda

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Alessandro SetteVerified email at liai.org
Gajendra PS RaghavaIndraprastha Institute of Information Technology, IIIT-Delhi , IndiaVerified email at iiitd.ac.in
Bjoern PetersProfessor at La Jolla Institute for ImmunologyVerified email at lji.org
Swapnil MahajanCo-founder & Director, DeepKnomicsVerified email at deepknomics.com
John SidneyLa Jolla Institute for AllergyVerified email at lji.org
Sinu PaulBioinformatics Scientist, Rancho BiosciencesVerified email at ranchobiosciences.com
Kumardeep ChaudharyCSIR-Institute of Genomics & Integrative Biology (IGIB)Verified email at igib.res.in
Alba GrifoniResearch Assistant Professor, La Jolla Institute for immunologyVerified email at lji.org
Sudheer Gupta3B Blackbio Biotech India Ltd.Verified email at 3bblackbio.com
James A. OvertonKnoceanVerified email at overton.ca
Pooja VirScientist, USU, HJFVerified email at usuhs.edu
sandeep singhSenior Scientist at CSIR-IITR LucknowVerified email at iitr.res.in
Morten NielsenDepartment of Health Technology, The Technical University ofVerified email at cbs.dtu.dk
Rahul KumarIndian Institute of Technology HyderabadVerified email at bt.iith.ac.in
Daniela WeiskopfLa Jolla Institute for ImmunologyVerified email at lji.org
Deepak SinglaSchool of Agricultural Biotechnology, Punjab Agricultural University, LudhianaVerified email at pau.edu
Massimo AndreattaLudwig Institute for Cancer Research, LausanneVerified email at unil.ch
Vanessa JurtzNovo Nordisk A/SVerified email at novonordisk.com
Piyush AgrawalAssistant Professor, Faculty of Medical & Health Sciences, SRM Inst of Science & Technology, ChennaiVerified email at srmist.edu.in
Brent A. Orr, MD, PhDMember, St. Jude Children's Research HospitalVerified email at stjude.org

Sandeep Kumar Dhanda

Other namesSandeep Dhanda, Sandeep Kumar

St. Jude Children's Research Hospital

Verified email at stjude.org - Homepage

Bioinformatics Immunology Oncology


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The immune epitope database (IEDB): 2018 update R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ... Nucleic acids research 47 (D1), D339-D343, 2019	1860	2019
Designing of interferon-gamma inducing MHC class-II binders SK Dhanda, P Vir, GPS Raghava Biology direct 8, 1-15, 2013	660	2013
The immune epitope database and analysis resource in epitope discovery and synthetic vaccine design W Fleri, S Paul, SK Dhanda, S Mahajan, X Xu, B Peters, A Sette Frontiers in immunology 8, 278, 2017	468	2017
IEDB-AR: immune epitope database—analysis resource in 2019 SK Dhanda, S Mahajan, S Paul, Z Yan, H Kim, MC Jespersen, V Jurtz, ... Nucleic acids research 47 (W1), W502-W506, 2019	333	2019
Prediction of IL4 inducing peptides SK Dhanda, S Gupta, P Vir, GPS Raghava Journal of Immunology Research 2013 (1), 263952, 2013	306	2013
Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential G Nagpal#, SS Usmani#, SK Dhanda#, H Kaur, S Singh, M Sharma, ... Scientific reports 7 (1), 42851, 2017	255	2017
SATPdb: a database of structurally annotated therapeutic peptides S Singh, K Chaudhary, SK Dhanda, S Bhalla, SS Usmani, A Gautam, ... Nucleic acids research 44 (D1), D1119-D1126, 2016	202	2016
Predicting HLA CD4 immunogenicity in human populations SK Dhanda, E Karosiene, L Edwards, A Grifoni, S Paul, M Andreatta, ... Frontiers in immunology 9, 1369, 2018	122	2018
Novel in silico tools for designing peptide-based subunit vaccines and immunotherapeutics SK Dhanda, SS Usmani, P Agrawal, G Nagpal, A Gautam, GPS Raghava Briefings in bioinformatics 18 (3), 467-478, 2017	119	2017
Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine S Gupta, K Chaudhary, R Kumar, A Gautam, JS Nanda, SK Dhanda, ... Scientific reports 6 (1), 23857, 2016	84	2016
Development of a novel clustering tool for linear peptide sequences SK Dhanda*, K Vaughan, V Schulten, A Grifoni, D Weiskopf, J Sidney, ... Immunology 155 (3), 331-345, 2018	78	2018
T cell responses induced by attenuated flavivirus vaccination are specific and show limited cross-reactivity with other flavivirus species A Grifoni, H Voic, SK Dhanda, CK Kidd, JD Brien, S Buus, A Stryhn, ... Journal of virology 94 (10), 10.1128/jvi. 00089-20, 2020	62	2020
ProCarDB: a database of bacterial carotenoids LNU Nupur, A Vats, SK Dhanda, GPS Raghava, AK Pinnaka, A Kumar BMC microbiology 16, 1-8, 2016	62	2016
ZikaVR: an integrated Zika virus resource for genomics, proteomics, phylogenetic and therapeutic analysis AK Gupta#, K Kaur#, A Rajput#, SK Dhanda#, M Sehgal, MS Khan, ... Scientific reports 6 (1), 32713, 2016	62	2016
Determination of a predictive cleavage motif for eluted major histocompatibility complex class II ligands S Paul, E Karosiene, SK Dhanda, V Jurtz, L Edwards, M Nielsen, A Sette, ... Frontiers in immunology 9, 1795, 2018	60	2018
Relevance of molecular groups in children with newly diagnosed atypical teratoid rhabdoid tumor: results from prospective St. Jude multi-institutional trials SA Upadhyaya, GW Robinson, A Onar-Thomas, BA Orr, P Johann, G Wu, ... Clinical cancer research 27 (10), 2879-2889, 2021	58	2021
DrugMint: a webserver for predicting and designing of drug-like molecules SK Dhanda, D Singla, AK Mondal, GPS Raghava Biology Direct 8, 1-12, 2013	58	2013
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020	46	2020
ImmunomeBrowser: a tool to aggregate and visualize complex and heterogeneous epitopes in reference proteins SK Dhanda*, R Vita, B Ha, A Grifoni, B Peters, A Sette Bioinformatics 34 (22), 3931-3933, 2018	44	2018
QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR JS Chauhan, SK Dhanda, D Singla, ... PloS one 9 (7), e101079, 2014	44	2014

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