| Metagenomic analysis of milk of healthy and mastitis-suffering women E Jiménez, J de Andrés, M Manrique, P Pareja-Tobes, R Tobes, ... Journal of Human Lactation 31 (3), 406-415, 2015 | 263 | 2015 |
| Genomic analysis of the emergence and evolution of multidrug resistance during a Klebsiella pneumoniae outbreak including carbapenem and colistin resistance E López-Camacho, R Gómez-Gil, R Tobes, M Manrique, M Lorenzo, ... Journal of Antimicrobial Chemotherapy 69 (3), 632-636, 2014 | 84 | 2014 |
| ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms E Pareja, P Pareja-Tobes, M Manrique, E Pareja-Tobes, J Bonal, R Tobes BMC microbiology 6, 1-10, 2006 | 74 | 2006 |
| BG7: a new approach for bacterial genome annotation designed for next generation sequencing data P Pareja-Tobes, M Manrique, E Pareja-Tobes, E Pareja, R Tobes PLoS One 7 (11), e49239, 2012 | 61 | 2012 |
| Normal Mutation Rate Variants Arise in a Mutator (Mut S) Escherichia coli Population MC Turrientes, F Baquero, BR Levin, JL Martínez, A Ripoll, ... PloS one 8 (9), e72963, 2013 | 43 | 2013 |
| Normal Mutation Rate Variants Arise in a Mutator (Mut S) Escherichia coli Population MC Turrientes, F Baquero, BR Levin, JL Martínez, A Ripoll, ... PloS one 8 (9), e72963, 2013 | 43 | 2013 |
| A Systems Biology Approach to the Characterization of Stress Response in Dermacentor reticulatus Tick Unfed Larvae M Villar, M Popara, N Ayllon, IG Fernandez de Mera, ... PLoS One 9 (2), e89564, 2014 | 39 | 2014 |
| Bio4j: a high-performance cloud-enabled graph-based data platform P Pareja-Tobes, R Tobes, M Manrique, E Pareja, E Pareja-Tobes BioRxiv, 016758, 2015 | 37 | 2015 |
| Comparative Genomics of Field Isolates of Mycobacterium bovis and M. caprae Provides Evidence for Possible Correlates with Bacterial Viability and Virulence J De la Fuente, I Díez-Delgado, M Contreras, J Vicente, A Cabezas-Cruz, ... PLoS Neglected Tropical Diseases 9 (11), e0004232, 2015 | 32 | 2015 |
| In vivo attenuation and genetic evolution of a ST247-SCCmecI MRSA clone after 13 years of pathogenic bronchopulmonary colonization in a patient with cystic fibrosis … E López-Collazo, T Jurado, J de Dios Caballero, M Pérez-Vázquez, ... Mucosal immunology 8 (2), 362-371, 2015 | 24 | 2015 |
| Complete genome sequences of isolates of Enterococcus faecium sequence type 117, a globally disseminated multidrug-resistant clone AP Tedim, VF Lanza, M Manrique, E Pareja, P Ruiz-Garbajosa, R Cantón, ... Genome announcements 5 (13), 10.1128/genomea. 01553-16, 2017 | 21 | 2017 |
| Early OXA-48-Producing Enterobacterales Isolates Recovered in a Spanish Hospital Reveal a Complex Introduction Dominated by Sequence Type 11 (ST11) and … D Gijón, AP Tedim, A Valverde, I Rodríguez, MI Morosini, TM Coque, ... MSphere 5 (2), 10.1128/msphere. 00080-20, 2020 | 18 | 2020 |
| Complete genome sequence of Ehrlichia mineirensis, a novel organism closely related to Ehrlichia canis with a new host association A Cabezas-Cruz, E Zweygarth, M Broniszweska, LMF Passos, ... Genome Announcements 3 (1), e01450-14, 2015 | 16 | 2015 |
| Complete genome sequences of field isolates of Mycobacterium bovis and Mycobacterium caprae J de La Fuente, I Díez-Delgado, M Contreras, J Vicente, A Cabezas-Cruz, ... Genome Announcements 3 (3), 10.1128/genomea. 00247-15, 2015 | 9 | 2015 |
| Gene calling and bacterial genome annotation with BG7 R Tobes, P Pareja-Tobes, M Manrique, E Pareja-Tobes, E Kovach, ... Bacterial Pangenomics: Methods and Protocols, 177-189, 2015 | 9 | 2015 |
| Bio4J: An Open source biological data integration platform. P Pareja-Tobes, E Pareja-Tobes, M Manrique, E Pareja, R Tobes IWBBIO, 281, 2013 | 8 | 2013 |
| Escherichia coli EHEC Germany outbreak preliminary functional annotation using BG7 system M Manrique, P Pareja-Tobes, E Pareja-Tobes, E Pareja, R Tobes Nature Precedings, 1-1, 2011 | 6 | 2011 |
| MG7: Configurable and scalable 16S metagenomics data analysis A Alekhin, E Kovach, M Manrique, P Pareja-Tobes, E Pareja, R Tobes, ... BioRxiv, 027714, 2015 | 4 | 2015 |
| Noncontiguous finished genome sequence of Staphylococcus aureus KLT6, a staphylococcal enterotoxin B-positive strain involved in a food poisoning outbreak in Switzerland R Tobes, M Manrique, M Brozynska, R Stephan, E Pareja, S Johler Genome announcements 1 (3), 10.1128/genomea. 00214-13, 2013 | 3 | 2013 |
| Genome sequence of Klebsiella pneumoniae KpQ3, a DHA-1 β-lactamase-producing nosocomial isolate R Tobes, FM Codoñer, E López-Camacho, IJ Salanueva, M Manrique, ... Genome announcements 1 (1), 10.1128/genomea. 00167-12, 2013 | 3 | 2013 |
