Martino Bertoni
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SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information
M Biasini, S Bienert, A Waterhouse, K Arnold, G Studer, T Schmidt, ...
Nucleic acids research 42 (W1), W252-W258, 2014
39292014
SWISS-MODEL: homology modelling of protein structures and complexes
A Waterhouse, M Bertoni, S Bienert, G Studer, G Tauriello, R Gumienny, ...
Nucleic acids research 46 (W1), W296-W303, 2018
21522018
Modeling protein quaternary structure of homo-and hetero-oligomers beyond binary interactions by homology
M Bertoni, F Kiefer, M Biasini, L Bordoli, T Schwede
Scientific reports 7 (1), 1-15, 2017
2732017
Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12
J Haas, A Barbato, D Behringer, G Studer, S Roth, M Bertoni, K Mostaguir, ...
Proteins: Structure, Function, and Bioinformatics 86, 387-398, 2018
472018
Assessment of protein assembly prediction in CASP12
A Lafita, S Bliven, A Kryshtafovych, M Bertoni, B Monastyrskyy, JM Duarte, ...
Proteins: Structure, Function, and Bioinformatics 86, 247-256, 2018
262018
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases
SIB Swiss Institute of Bioinformatics Members
Nucleic acids research 44 (D1), D27-D37, 2016
232016
Extending the small-molecule similarity principle to all levels of biology with the Chemical Checker
M Duran-Frigola, E Pauls, O Guitart-Pla, M Bertoni, V Alcalde, D Amat, ...
Nature Biotechnology, 1-10, 2020
9*2020
Formatting biological big data for modern machine learning in drug discovery
M Duran‐Frigola, A Fernández‐Torras, M Bertoni, P Aloy
Wiley Interdisciplinary Reviews: Computational Molecular Science 9 (6), e1408, 2019
92019
Modeling of protein tertiary and quaternary structures based on evolutionary information
G Studer, G Tauriello, S Bienert, AM Waterhouse, M Bertoni, L Bordoli, ...
Computational Methods in Protein Evolution, 301-316, 2019
52019
Heer Florian T, de Beer Tjaart A P, Rempfer Christine, Bordoli Lorenza, Lepore Rosalba, Schwede Torsten. SWISS-MODEL: homology modelling of protein structures and complexes
W Andrew, B Martino, B Stefan, S Gabriel, T Gerardo, G Rafal
Nucleic Acids Research 46 (W1), W296-W303, 2018
42018
A non-deterministic approach to forecasting the trophic evolution of lakes
R Bertoni, M Bertoni, G Morabito, M Rogora, C Callieri
J. Limnol 75 (s1), 242-252, 2016
32016
GeNet: a graph-based genetic programming framework for the reverse engineering of gene regulatory networks
L Vanneschi, M Mondini, M Bertoni, A Ronchi, M Stefano
European Conference on Evolutionary Computation, Machine Learning and Data …, 2012
32012
Introducing “best single template” models as reference baseline for the Continuous Automated Model Evaluation (CAMEO)
J Haas, R Gumienny, A Barbato, F Ackermann, G Tauriello, M Bertoni, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1378-1387, 2019
22019
DynBench3D, a Web-Resource to Dynamically Generate Benchmark Sets of Large Heteromeric Protein Complexes
M Bertoni, P Aloy
Journal of molecular biology 430 (21), 4431-4438, 2018
22018
Gene regulatory networks reconstruction from time series datasets using genetic programming: a comparison between tree-based and graph-based approaches
L Vanneschi, M Mondini, M Bertoni, A Ronchi, M Stefano
Genetic Programming and Evolvable Machines 14 (4), 431-455, 2013
22013
Bioactivity profile similarities to expand the repertoire of COVID-19 drugs
M Duran-Frigola, M Bertoni, R Blanco, V Martínez, E Pauls, V Alcalde, ...
Journal of Chemical Information and Modeling, 2020
2020
Bioactivity descriptors for uncharacterized compounds
M Bertoni, M Duran-Frigola, P Badia-i-Mompel, E Pauls, M Orozco-Ruiz, ...
bioRxiv, 2020
2020
Cover Image, Volume 9, Issue 6
M Duran‐Frigola, A Fernández‐Torras, M Bertoni, P Aloy
Wiley Interdisciplinary Reviews: Computational Molecular Science 9 (6), e1451, 2019
2019
Modeling homo-and hetero-oligomers using in silico prediction of protein quaternary structure
M Bertoni
University of Basel, 2016
2016
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Artikelen 1–19