Ryan Suderman
Ryan Suderman
Immunetrics, Inc.
Verified email at immunetrics.com - Homepage
Title
Cited by
Cited by
Year
Fundamental trade-offs between information flow in single cells and cellular populations
R Suderman, JA Bachman, A Smith, PK Sorger, EJ Deeds
Proceedings of the National Academy of Sciences 114 (22), 5755-5760, 2017
782017
Machines vs. ensembles: effective MAPK signaling through heterogeneous sets of protein complexes
R Suderman, EJ Deeds
PLoS Comput Biol 9 (10), e1003278, 2013
552013
PyBioNetFit and the biological property specification language
ED Mitra, R Suderman, J Colvin, A Ionkov, A Hu, HM Sauro, RG Posner, ...
IScience 19, 1012-1036, 2019
192019
Generalizing Gillespie’s direct method to enable network-free simulations
R Suderman, ED Mitra, YT Lin, KE Erickson, S Feng, WS Hlavacek
Bulletin of mathematical biology 81 (8), 2822-2848, 2019
162019
Preassembled GPCR signaling complexes mediate distinct cellular responses to ultralow ligand concentrations
S Civciristov, AM Ellisdon, R Suderman, CK Pon, BA Evans, O Kleifeld, ...
Science signaling 11 (551), 2018
112018
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor
KE Erickson, OS Rukhlenko, M Shahinuzzaman, KP Slavkova, YT Lin, ...
PLoS computational biology 15 (1), e1006706, 2019
72019
TRuML: a translator for rule-based modeling languages
R Suderman, WS Hlavacek
Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017
52017
Intrinsic limits of information transmission in biochemical signalling motifs
R Suderman, EJ Deeds
Interface focus 8 (6), 20180039, 2018
42018
A step-by-step guide to using BioNetFit
WS Hlavacek, JA Csicsery-Ronay, LR Baker, MCR Álamo, A Ionkov, ...
Modeling Biomolecular Site Dynamics, 391-419, 2019
32019
Understanding the dynamics of scaffold-mediated signaling
R Suderman, A Schauer, EJ Deeds
bioRxiv, 167205, 2017
22017
PyBioNetFit
E Mitra, R Suderman, A Ionkov, W Hlavacek, National Institutes of Health
Los Alamos National Lab.(LANL), Los Alamos, NM (United States), 2018
12018
The Noise is the Signal: Information Flow in Single Cells and Cellular Populations
R Suderman, J Bachman, A Smith, P Sorger, EJ Deeds
10th Annual q-bio Conference, Nashville, TN, 0
1
Using RuleBuilder to graphically define and visualize BioNetGen-language patterns and reaction rules
R Suderman, GM Fricke, WS Hlavacek
Modeling Biomolecular Site Dynamics, 33-42, 2019
2019
Modeling cell activation at ultra-low ligand concentrations
RT Suderman, WS Hlavacek
Los Alamos National Lab.(LANL), Los Alamos, NM (United States), 2018
2018
Identification and rejection of pile-up jets at high pseudorapidity with the ATLAS detector
A Collaboration
Eur. Phys. J. C 77, 580, 2017
2017
High dose of EGF ligand leads to greater EGFR degradation via Rab7 activation
CC Palsuledesai, T Shideler, R Suderman, T Shi, CD Nicora, RD Smith, ...
MOLECULAR BIOLOGY OF THE CELL 28, 2017
2017
Heterogeneity and Decision-Making in Cellular Signaling Networks
R Suderman
University of Kansas, 2016
2016
Phenotypic Properties of Scaffold-Based Signaling Paradigms
R Suderman, A Schauer, EJ Deeds
Biophysical Journal 108 (2), 614a, 2015
2015
Publicly Accessible Repository
E Mitra, R Suderman, A Ionkov, W Hlavacek
A theoretical analysis of the potential influence of ITAM pairs on Syk recruitment dynamics
R Suderman, SL Schwartz, DS Lidke, WS Hlavacek
The system can't perform the operation now. Try again later.
Articles 1–20