Joseph Vineis
Joseph Vineis
Marine Biological Laboratory/Northeastern University
Verified email at
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Anvi’o: an advanced analysis and visualization platform for ‘omics data
AM Eren, ÷C Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PeerJ 3, e1319, 2015
Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
AM Eren, HG Morrison, PJ Lescault, J Reveillaud, JH Vineis, ML Sogin
The ISME journal 9 (4), 968-979, 2015
A filtering method to generate high quality short reads using Illumina paired-end technology
AM Eren, JH Vineis, HG Morrison, ML Sogin
PloS one 8 (6), e66643, 2013
Sewage reflects the microbiomes of human populations
RJ Newton, SL McLellan, DK Dila, JH Vineis, HG Morrison, AM Eren, ...
MBio 6 (2), e02574-14, 2015
A single genus in the gut microbiome reflects host preference and specificity
AM Eren, ML Sogin, HG Morrison, JH Vineis, JC Fisher, RJ Newton, ...
The ISME journal 9 (1), 90-100, 2015
Anvi’o: an advanced analysis and visualization platform for ‘omics data. PeerJ 3: e1319
AM Eren, ÷C Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects
SM Huse, VB Young, HG Morrison, DA Antonopoulos, J Kwon, S Dalal, ...
Microbiome 2 (1), 1-8, 2014
Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
L Mirabello, JH Vineis, SP Yanoviak, VM Scarpassa, MM Půvoa, N Padilla, ...
BMC ecology 8 (1), 1-15, 2008
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil
JE Conn, JH Vineis, JP Bollback, DY Onyabe, RC Wilkerson, MM Půvoa
The American journal of tropical medicine and hygiene 74 (5), 798-806, 2006
The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology
HC Poynton, S Hasenbein, JB Benoit, MS Sepulveda, MF Poelchau, ...
Environmental science & technology 52 (10), 6009-6022, 2018
Comparison of sewage and animal fecal microbiomes by using oligotyping reveals potential human fecal indicators in multiple taxonomic groups
JC Fisher, AM Eren, HC Green, OC Shanks, HG Morrison, JH Vineis, ...
Applied and environmental microbiology 81 (20), 7023-7033, 2015
Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis
VB Young, LH Raffals, SM Huse, M Vital, D Dai, PD Schloss, JM Brulc, ...
Microbiome 1 (1), 1-11, 2013
Detection of Broadly Distributed Sodium Channel Alleles Characteristic of Insect Pyrethroid Resistance in West Nile Virus Vector Culex pipiens Complex†…
L Zhou, GG Lawrence, JH Vineis, JC McAllister, RA Wirtz, WG Brogdon
Journal of medical entomology 46 (2), 321-327, 2009
Anvi’o: an advanced analysis and visualization platform for ‘omics data. PeerJ. 2015; 3: e1319
AM Eren, OC Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PubMed Abstract| Publisher Full Text| Free Full Text, 0
Patient-Specific Bacteroides Genome Variants in Pouchitis
JH Vineis, DL Ringus, HG Morrison, TO Delmont, S Dalal, LH Raffals, ...
MBio 7 (6), e01713-16, 2016
Evidence for late Pleistocene population expansion of the malarial mosquitoes, Anopheles arabiensis and Anopheles gambiae in Nigeria
SD Matthews, LJ Meehan, DY Onyabe, J Vineis, I Nock, I Ndams, ...
Medical and veterinary entomology 21 (4), 358-369, 2007
Sulphide addition favours respiratory ammonification (DNRA) over complete denitrification and alters the active microbial community in salt marsh sediments
AE Murphy, AN Bulseco, R Ackerman, JH Vineis, JL Bowen
Environmental microbiology 22 (6), 2124-2139, 2020
Microbial community response to a passive salt marsh restoration
CA Lynum, AN Bulseco, CM Dunphy, SM Osborne, JH Vineis, JL Bowen
Estuaries and Coasts, 1-17, 2020
Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments
AN Bulseco, JH Vineis, AE Murphy, AC Spivak, AE Giblin, J Tucker, ...
Limnology and Oceanography 65, S321-S339, 2020
JH Vineis, DL Ringus, HG Morrison, TO Delmont, S Dalal, LH Raffals, ...
Bacteroides, 2016
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