| Detecting temporal protein complexes from dynamic protein-protein interaction networks L Ou-Yang, DQ Dai, XL Li, M Wu, XF Zhang, P Yang BMC bioinformatics 15 (1), 1-14, 2014 | 71 | 2014 |
| Determining minimum set of driver nodes in protein-protein interaction networks XF Zhang, L Ou-Yang, Y Zhu, MY Wu, DQ Dai BMC bioinformatics 16 (1), 1-13, 2015 | 59 | 2015 |
| Detecting overlapping protein complexes based on a generative model with functional and topological properties XF Zhang, DQ Dai, L Ou-Yang, H Yan BMC bioinformatics 15 (1), 1-15, 2014 | 48 | 2014 |
| Incorporating prior information into differential network analysis using non-paranormal graphical models XF Zhang, L Ou-Yang, H Yan Bioinformatics 33 (16), 2436-2445, 2017 | 39 | 2017 |
| Differential network analysis from cross-platform gene expression data XF Zhang, L Ou-Yang, XM Zhao, H Yan Scientific reports 6 (1), 1-12, 2016 | 37 | 2016 |
| Detecting protein complexes from signed protein-protein interaction networks L Ou-Yang, DQ Dai, XF Zhang IEEE/ACM transactions on computational biology and bioinformatics 12 (6 …, 2015 | 33 | 2015 |
| Protein complex detection via weighted ensemble clustering based on Bayesian nonnegative matrix factorization L Ou-Yang, DQ Dai, XF Zhang PloS one 8 (5), e62158, 2013 | 33 | 2013 |
| A graph regularized generalized matrix factorization model for predicting links in biomedical bipartite networks ZC Zhang, XF Zhang, M Wu, L Ou-Yang, XM Zhao, XL Li Bioinformatics 36 (11), 3474-3481, 2020 | 29 | 2020 |
| Integrating node embeddings and biological annotations for genes to predict disease-gene associations SK Ata, L Ou-Yang, Y Fang, CK Kwoh, M Wu, XL Li BMC systems biology 12 (9), 31-44, 2018 | 26 | 2018 |
| Exploring overlapping functional units with various structure in protein interaction networks XF Zhang, DQ Dai, L Ou-Yang, MY Wu Public Library of Science 7 (8), e43092, 2012 | 24 | 2012 |
| Predicting the impacts of mutations on protein-ligand binding affinity based on molecular dynamics simulations and machine learning methods DD Wang, L Ou-Yang, H Xie, M Zhu, H Yan Computational and structural biotechnology journal 18, 439-454, 2020 | 21 | 2020 |
| Regularized logistic regression with network-based pairwise interaction for biomarker identification in breast cancer MY Wu, XF Zhang, DQ Dai, L Ou-Yang, Y Zhu, H Yan BMC bioinformatics 17 (1), 1-18, 2016 | 21 | 2016 |
| RepLong: de novo repeat identification using long read sequencing data R Guo, YR Li, S He, L Ou-Yang, Y Sun, Z Zhu Bioinformatics 34 (7), 1099-1107, 2018 | 20 | 2018 |
| EnImpute: imputing dropout events in single-cell RNA-sequencing data via ensemble learning XF Zhang, L Ou-Yang, S Yang, XM Zhao, X Hu, H Yan Bioinformatics 35 (22), 4827-4829, 2019 | 18 | 2019 |
| Identifying gene network rewiring by integrating gene expression and gene network data T Xu, L Ou-Yang, X Hu, XF Zhang IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (6 …, 2018 | 17 | 2018 |
| A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks L Ou-Yang, H Yan, XF Zhang BMC bioinformatics 18 (13), 23-34, 2017 | 17 | 2017 |
| A two-layer integration framework for protein complex detection L Ou-Yang, M Wu, XF Zhang, DQ Dai, XL Li, H Yan BMC bioinformatics 17 (1), 1-14, 2016 | 17 | 2016 |
| Microbial community pattern detection in human body habitats via ensemble clustering framework P Yang, X Su, L Ou-Yang, HN Chua, XL Li, K Ning BMC systems biology 8 (4), 1-12, 2014 | 15 | 2014 |
| Identifying differential networks based on multi-platform gene expression data L Ou-Yang, H Yan, XF Zhang Molecular BioSystems 13 (1), 183-192, 2017 | 14 | 2017 |
| Protein complex detection via effective integration of base clustering solutions and co-complex affinity scores M Wu, L Ou-Yang, XL Li IEEE/ACM transactions on computational biology and bioinformatics 14 (3 …, 2016 | 14 | 2016 |
Xiao-Fei ZhangSchool of Mathematics and Statistics, Central China Normal UniversityGeverifieerd e-mailadres voor mail.ccnu.edu.cn
