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Le Ou-Yang
Le Ou-Yang
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Detecting temporal protein complexes from dynamic protein-protein interaction networks
L Ou-Yang, DQ Dai, XL Li, M Wu, XF Zhang, P Yang
BMC bioinformatics 15 (1), 1-14, 2014
712014
Determining minimum set of driver nodes in protein-protein interaction networks
XF Zhang, L Ou-Yang, Y Zhu, MY Wu, DQ Dai
BMC bioinformatics 16 (1), 1-13, 2015
592015
Detecting overlapping protein complexes based on a generative model with functional and topological properties
XF Zhang, DQ Dai, L Ou-Yang, H Yan
BMC bioinformatics 15 (1), 1-15, 2014
482014
Incorporating prior information into differential network analysis using non-paranormal graphical models
XF Zhang, L Ou-Yang, H Yan
Bioinformatics 33 (16), 2436-2445, 2017
392017
Differential network analysis from cross-platform gene expression data
XF Zhang, L Ou-Yang, XM Zhao, H Yan
Scientific reports 6 (1), 1-12, 2016
372016
Detecting protein complexes from signed protein-protein interaction networks
L Ou-Yang, DQ Dai, XF Zhang
IEEE/ACM transactions on computational biology and bioinformatics 12 (6 …, 2015
332015
Protein complex detection via weighted ensemble clustering based on Bayesian nonnegative matrix factorization
L Ou-Yang, DQ Dai, XF Zhang
PloS one 8 (5), e62158, 2013
332013
A graph regularized generalized matrix factorization model for predicting links in biomedical bipartite networks
ZC Zhang, XF Zhang, M Wu, L Ou-Yang, XM Zhao, XL Li
Bioinformatics 36 (11), 3474-3481, 2020
292020
Integrating node embeddings and biological annotations for genes to predict disease-gene associations
SK Ata, L Ou-Yang, Y Fang, CK Kwoh, M Wu, XL Li
BMC systems biology 12 (9), 31-44, 2018
262018
Exploring overlapping functional units with various structure in protein interaction networks
XF Zhang, DQ Dai, L Ou-Yang, MY Wu
Public Library of Science 7 (8), e43092, 2012
242012
Predicting the impacts of mutations on protein-ligand binding affinity based on molecular dynamics simulations and machine learning methods
DD Wang, L Ou-Yang, H Xie, M Zhu, H Yan
Computational and structural biotechnology journal 18, 439-454, 2020
212020
Regularized logistic regression with network-based pairwise interaction for biomarker identification in breast cancer
MY Wu, XF Zhang, DQ Dai, L Ou-Yang, Y Zhu, H Yan
BMC bioinformatics 17 (1), 1-18, 2016
212016
RepLong: de novo repeat identification using long read sequencing data
R Guo, YR Li, S He, L Ou-Yang, Y Sun, Z Zhu
Bioinformatics 34 (7), 1099-1107, 2018
202018
EnImpute: imputing dropout events in single-cell RNA-sequencing data via ensemble learning
XF Zhang, L Ou-Yang, S Yang, XM Zhao, X Hu, H Yan
Bioinformatics 35 (22), 4827-4829, 2019
182019
Identifying gene network rewiring by integrating gene expression and gene network data
T Xu, L Ou-Yang, X Hu, XF Zhang
IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (6 …, 2018
172018
A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks
L Ou-Yang, H Yan, XF Zhang
BMC bioinformatics 18 (13), 23-34, 2017
172017
A two-layer integration framework for protein complex detection
L Ou-Yang, M Wu, XF Zhang, DQ Dai, XL Li, H Yan
BMC bioinformatics 17 (1), 1-14, 2016
172016
Microbial community pattern detection in human body habitats via ensemble clustering framework
P Yang, X Su, L Ou-Yang, HN Chua, XL Li, K Ning
BMC systems biology 8 (4), 1-12, 2014
152014
Identifying differential networks based on multi-platform gene expression data
L Ou-Yang, H Yan, XF Zhang
Molecular BioSystems 13 (1), 183-192, 2017
142017
Protein complex detection via effective integration of base clustering solutions and co-complex affinity scores
M Wu, L Ou-Yang, XL Li
IEEE/ACM transactions on computational biology and bioinformatics 14 (3 …, 2016
142016
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Artikelen 1–20