|Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography|
P Normand, P Lapierre, LS Tisa, JP Gogarten, N Alloisio, E Bagnarol, ...
Genome research 17 (1), 7-15, 2007
|Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome|
DM Bickhart, BD Rosen, S Koren, BL Sayre, AR Hastie, S Chan, J Lee, ...
Nature genetics 49 (4), 643-650, 2017
|Copy number variation of individual cattle genomes using next-generation sequencing|
DM Bickhart, Y Hou, SG Schroeder, C Alkan, MF Cardone, ...
Genome research 22 (4), 778-790, 2012
|On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales|
O Zhaxybayeva, KS Swithers, P Lapierre, GP Fournier, DM Bickhart, ...
Proceedings of the National Academy of Sciences 106 (14), 5865-5870, 2009
|Genomic characteristics of cattle copy number variations|
Y Hou, GE Liu, DM Bickhart, MF Cardone, K Wang, E Kim, LK Matukumalli, ...
BMC genomics 12 (1), 127, 2011
|Cattle sex-specific recombination and genetic control from a large pedigree analysis|
L Ma, JR O'Connell, PM VanRaden, B Shen, A Padhi, C Sun, DM Bickhart, ...
PLoS Genet 11 (11), e1005387, 2015
|Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping|
LR Porto-Neto, TS Sonstegard, GE Liu, DM Bickhart, MVB Da Silva, ...
BMC genomics 14 (1), 876, 2013
|Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle|
Y Hou, GE Liu, DM Bickhart, LK Matukumalli, C Li, J Song, LC Gasbarre, ...
Functional & integrative genomics 12 (1), 81-92, 2012
|Identification of a nonsense mutation in CWC15 associated with decreased reproductive efficiency in Jersey cattle|
TS Sonstegard, JB Cole, PM VanRaden, CP Van Tassell, DJ Null, ...
PloS one 8 (1), e54872, 2013
|De novo assembly of haplotype-resolved genomes with trio binning|
S Koren, A Rhie, BP Walenz, AT Dilthey, DM Bickhart, SB Kingan, ...
Nature biotechnology 36 (12), 1174-1182, 2018
|Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array|
Y Hou, DM Bickhart, ML Hvinden, C Li, J Song, DA Boichard, S Fritz, ...
BMC genomics 13 (1), 1-10, 2012
|Genomic signatures reveal new evidences for selection of important traits in domestic cattle|
L Xu, DM Bickhart, JB Cole, SG Schroeder, J Song, CPV Tassell, ...
Molecular biology and evolution 32 (3), 711-725, 2015
|Genome wide CNV analysis reveals additional variants associated with milk production traits in Holsteins|
L Xu, JB Cole, DM Bickhart, Y Hou, J Song, PM VanRaden, ...
BMC genomics 15 (1), 683, 2014
|Bovine exome sequence analysis and targeted SNP genotyping of recessive fertility defects BH1, HH2, and HH3 reveal a putative causative mutation in SMC2 for HH3|
MC McClure, D Bickhart, D Null, P VanRaden, L Xu, G Wiggans, G Liu, ...
PloS one 9 (3), e92769, 2014
|The challenges and importance of structural variation detection in livestock|
DM Bickhart, GE Liu
Frontiers in genetics 5, 37, 2014
|Selecting sequence variants to improve genomic predictions for dairy cattle|
PM VanRaden, ME Tooker, JR O’connell, JB Cole, DM Bickhart
Genetics Selection Evolution 49 (1), 32, 2017
|Analysis of copy number variations in Holstein cows identify potential mechanisms contributing to differences in residual feed intake|
Y Hou, DM Bickhart, H Chung, JL Hutchison, HD Norman, EE Connor, ...
Functional & integrative genomics 12 (4), 717-723, 2012
|Scaffolding of long read assemblies using long range contact information|
J Ghurye, M Pop, S Koren, D Bickhart, CS Chin
BMC genomics 18 (1), 1-11, 2017
|Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle|
AMP O’brien, YT Utsunomiya, G Mészáros, DM Bickhart, GE Liu, ...
Genetics Selection Evolution 46 (1), 19, 2014
|Population-genetic properties of differentiated copy number variations in cattle|
L Xu, Y Hou, DM Bickhart, Y Zhou, J Song, TS Sonstegard, ...
Scientific reports 6 (1), 1-8, 2016