Mark A. Ragan

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Cheong Xin ChanAustralian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University ofVerified email at uq.edu.au
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityVerified email at dal.ca
Melissa J DavisDirector, Computational Biology, Isomorphic LabsVerified email at isomorphiclabs.com
David MillerProfessor, James Cook UniversityVerified email at jcu.edu.au
Chanyarat Paungfoo-LonhienneThe University of QueenslandVerified email at uq.edu.au
Robin R. GutellProfessor, Department of Integrative Biology, University of Texas at AustinVerified email at austin.utexas.edu
Sriganesh SrihariQIMR-Berghofer Medical Research InstituteVerified email at qimrberghofer.edu.au
Raúl A. González-PechEberly Postdoctoral Research Fellow at Pennsylvania State UniversityVerified email at psu.edu
Susanne.Schmidt@uq.edu.auProfessor, School of Agriculture and Food Sustainability, The University of Queensland, AustraliaVerified email at uq.edu.au
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Terry GaasterlandUniversity of California San DiegoVerified email at ucsd.edu
Christoph W. SensenDG & CEO, HCEMM Kft.Verified email at hcemm.eu
Yun Kit YeohAustralian Institute of Marine Science (AIMS)Verified email at aims.gov.au
Aaron DarlingIndependentVerified email at illumina.com
W. Ford DoolittleDalhousie UniversityVerified email at dal.ca
Guillaume BernardPostdoctoral Fellow, Institut de Biologie de L’Ecole Normale Supérieure (IBENS)Verified email at bio.ens.psl.eu
Elizabeth SkippingtonSenior Scientist, Bioinformatics and Computational Biology, GenentechVerified email at gene.com
Karen R. LipsUniversity of Maryland, Southern Illinois University, St. Lawrence UniversityVerified email at umd.edu
Alex HyattFellow CSIROVerified email at csiro.au
Rick SpeareJames Cook UniversityVerified email at jcu.edu.au

Mark A. Ragan

Institute for Molecular Bioscience, The University of Queensland

Verified email at uq.edu.au - Homepage

Computational genomics bioinformatics evolutionary biology systems biology marine biology


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Chytridiomycosis causes amphibian mortality associated with population declines in the rain forests of Australia and Central America L Berger, R Speare, P Daszak, DE Green, AA Cunningham, CL Goggin, ... Proceedings of the National Academy of Sciences 95 (15), 9031-9036, 1998	2796	1998
The complete genome of the crenarchaeon Sulfolobus solfataricus P2 Q She, RK Singh, F Confalonieri, Y Zivanovic, G Allard, MJ Awayez, ... Proceedings of the National Academy of Sciences 98 (14), 7835-7840, 2001	973	2001
Phlorotannins, brown algal polyphenols MA Ragan, KW Glombitza Progress in Phycological Research 4, 129-241, 1986	860	1986
Identification of domoic acid, a neuroexcitatory amino acid, in toxic mussels from eastern Prince Edward Island JLC Wright, RK Boyd, ASW Freitas, M Falk, RA Foxall, WD Jamieson, ... Canadian Journal of Chemistry 67 (3), 481-490, 1989	620	1989
Highways of gene sharing in prokaryotes RG Beiko, TJ Harlow, MA Ragan Proceedings of the National Academy of Sciences 102 (40), 14332-14337, 2005	587	2005
Phylogenetic inference based on matrix representation of trees MA Ragan Molecular phylogenetics and evolution 1 (1), 53-58, 1992	563	1992
Visualization of image data from cells to organisms T Walter, DW Shattuck, R Baldock, ME Bastin, AE Carpenter, S Duce, ... Nature methods 7 (Suppl 3), S26-S41, 2010	328	2010
Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence YK Yeoh, PG Dennis, C Paungfoo-Lonhienne, L Weber, R Brackin, ... Nature communications 8 (1), 215, 2017	298	2017
Dynamics of genome rearrangement in bacterial populations AE Darling, I Miklós, MA Ragan PLoS Genetics 4 (7), e1000128, 2008	277	2008
A molecular phylogeny of the marine red algae (Rhodophyta) based on the nuclear small-subunit rRNA gene. MA Ragan, CJ Bird, EL RicE, RR Gutell, CA Murphy, RK Singh Proceedings of the National Academy of Sciences 91 (15), 7276-7280, 1994	254	1994
Nitrogen fertilizer dose alters fungal communities in sugarcane soil and rhizosphere C Paungfoo-Lonhienne, YK Yeoh, NRP Kasinadhuni, TGA Lonhienne, ... Scientific reports 5, 8678, 2015	240	2015
Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates KS Kassahn, VT Dang, SJ Wilkins, AC Perkins, MA Ragan Genome research 19 (8), 1404-1418, 2009	235	2009
Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database A Bissett, A Fitzgerald, T Meintjes, PM Mele, F Reith, PG Dennis, ... GigaScience 5, 21, 2016	232	2016
The mammalian PYHIN gene family: phylogeny, evolution and expression JA Cridland, EZ Curley, MN Wykes, K Schroder, MJ Sweet, TL Roberts, ... BMC evolutionary biology 12, 1-17, 2012	230	2012
A genomic view of the reef-building coral Porites lutea and its microbial symbionts SJ Robbins, CM Singleton, CX Chan, LF Messer, AU Geers, H Ying, ... Nature microbiology 4 (12), 2090-2100, 2019	226	2019
On surrogate methods for detecting lateral gene transfer MA Ragan FEMS Microbiology letters 201 (2), 187-191, 2001	225	2001
Detection of lateral gene transfer among microbial genomes MA Ragan Current opinion in genetics & development 11 (6), 620-626, 2001	224	2001
A novel clade of protistan parasites near the animal-fungal divergence. MA Ragan, CL Goggin, RJ Cawthorn, L Cerenius, AV Jamieson, ... Proceedings of the National Academy of Sciences 93 (21), 11907-11912, 1996	220	1996
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... Communications biology 1 (1), 95, 2018	207	2018
Lateral genetic transfer and the construction of genetic exchange communities E Skippington, MA Ragan FEMS microbiology reviews 35 (5), 707-735, 2011	203	2011

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