Emrah Köstem
Emrah Köstem
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Genetic control of obesity and gut microbiota composition in response to high-fat, high-sucrose diet in mice
BW Parks, E Nam, E Org, E Kostem, F Norheim, ST Hui, C Pan, M Civelek, ...
Cell metabolism 17 (1), 141-152, 2013
Identifying causal variants at loci with multiple signals of association
F Hormozdiari, E Kostem, EY Kang, B Pasaniuc, E Eskin
Genetics 198 (2), 497-508, 2014
A community resource benchmarking predictions of peptide binding to MHC-I molecules
B Peters, HH Bui, S Frankild, M Nielsen, C Lundegaard, E Kostem, ...
PLoS computational biology 2 (6), e65, 2006
A high-resolution association mapping panel for the dissection of complex traits in mice
BJ Bennett, CR Farber, L Orozco, HM Kang, A Ghazalpour, N Siemers, ...
Genome research 20 (2), 281-290, 2010
Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing
S Amini, D Pushkarev, L Christiansen, E Kostem, T Royce, C Turk, ...
Nature genetics 46 (12), 1343-1349, 2014
Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits
A Ghazalpour, CD Rau, CR Farber, BJ Bennett, LD Orozco, A van Nas, ...
Mammalian genome 23 (9), 680-692, 2012
Mouse Genome-Wide Association and Systems Genetics Identify Asxl2 As a Regulator of Bone Mineral Density and Osteoclastogenesis
CR Farber, BJ Bennett, L Orozco, W Zou, A Lira, E Kostem, HM Kang, ...
PLoS genetics 7 (4), e1002038, 2011
Fine mapping in 94 inbred mouse strains using a high-density haplotype resource
A Kirby, HM Kang, CM Wade, C Cotsapas, E Kostem, B Han, N Furlotte, ...
Genetics 185 (3), 1081-1095, 2010
Accounting for population structure in gene-by-environment interactions in genome-wide association studies using mixed models
JH Sul, M Bilow, WY Yang, E Kostem, N Furlotte, D He, E Eskin
PLoS genetics 12 (3), e1005849, 2016
Improving the accuracy and efficiency of partitioning heritability into the contributions of genomic regions
E Kostem, E Eskin
The American Journal of Human Genetics 92 (4), 558-564, 2013
Increasing power of genome-wide association studies by collecting additional single-nucleotide polymorphisms
E Kostem, JA Lozano, E Eskin
Genetics 188 (2), 449-460, 2011
High-resolution association mapping of atherosclerosis loci in mice
BJ Bennett, L Orozco, E Kostem, A Erbilgin, M Dallinga, I Neuhaus, ...
Arteriosclerosis, thrombosis, and vascular biology 32 (8), 1790-1798, 2012
Functional genomic assessment of phosgene-induced acute lung injury in mice
GD Leikauf, VJ Concel, K Bein, P Liu, A Berndt, TM Martin, K Ganguly, ...
American journal of respiratory cell and molecular biology 49 (3), 368-383, 2013
Haplotype resolved genome sequencing
E Kostem, S Amini
US Patent 9,670,530, 2017
Efficiently identifying significant associations in genome-wide association studies
E Kostem, E Eskin
Journal of Computational Biology 20 (10), 817-830, 2013
An association mapping framework to account for potential sex difference in genetic architectures
EY Kang, CH Lee, NA Furlotte, JWJ Joo, E Kostem, N Zaitlen, E Eskin, ...
Genetics 209 (3), 685-698, 2018
Genetic determinants of ammonia-induced acute lung injury in mice
K Bein, K Ganguly, TM Martin, VJ Concel, KA Brant, YPP Di, S Upadhyay, ...
American Journal of Physiology-Lung Cellular and Molecular Physiology 320 (1 …, 2021
Systems and Devices for Characterization and Performance Analysis of Pixel-Based Sequencing
E Kostem
US Patent App. 16/874,599, 2020
Base Calling Using Convolutions
E Kostem
US Patent App. 16/874,633, 2020
Systems and Devices for High-Throughput Sequencing with Semiconductor-Based Detection
D Dehlinger, A Agah, TH Fung, E Kostem, C Hetherington
US Patent App. 16/241,905, 2019
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