| Orchestration of floral initiation by APETALA1 K Kaufmann, F Wellmer, JM Muiño, T Ferrier, SE Wuest, V Kumar, ... science 328 (5974), 85-89, 2010 | 449 | 2010 |
| Target genes of the MADS transcription factor SEPALLATA3: integration of developmental and hormonal pathways in the Arabidopsis flower K Kaufmann, JM Muino, R Jauregui, CA Airoldi, C Smaczniak, ... PLoS Biol 7 (4), e1000090, 2009 | 405 | 2009 |
| Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development C Smaczniak, RGH Immink, JM Muiño, R Blanvillain, M Busscher, ... Proceedings of the National Academy of Sciences 109 (5), 1560-1565, 2012 | 370 | 2012 |
| Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP) K Kaufmann, JM Muino, M Østerås, L Farinelli, P Krajewski, GC Angenent Nature protocols 5 (3), 457-472, 2010 | 271 | 2010 |
| Arabidopsis class I and class II TCP transcription factors regulate jasmonic acid metabolism and leaf development antagonistically S Danisman, F Van der Wal, S Dhondt, R Waites, S de Folter, A Bimbo, ... Plant physiology 159 (4), 1511-1523, 2012 | 200 | 2012 |
| Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development A Pajoro, P Madrigal, JM Muiño, JT Matus, J Jin, MA Mecchia, ... Genome biology 15 (3), 1-19, 2014 | 156 | 2014 |
| The BABY BOOM transcription factor activates the LEC1-ABI3-FUS3-LEC2 network to induce somatic embryogenesis A Horstman, M Li, I Heidmann, M Weemen, B Chen, JM Muino, ... Plant physiology 175 (2), 848-857, 2017 | 91 | 2017 |
| Balancing of histone H3K4 methylation states by the Kdm5c/SMCX histone demethylase modulates promoter and enhancer function NS Outchkourov, JM Muiño, K Kaufmann, WFJ van IJcken, ... Cell reports 3 (4), 1071-1079, 2013 | 85 | 2013 |
| ChIP-seq Analysis in R (CSAR): An R package for the statistical detection of protein-bound genomic regions JM Muiño, K Kaufmann, RCHJ van Ham, GC Angenent, P Krajewski Plant methods 7 (1), 1-8, 2011 | 81 | 2011 |
| The histone deacetylase inhibitor trichostatin a promotes totipotency in the male gametophyte H Li, M Soriano, J Cordewener, JM Muiño, T Riksen, H Fukuoka, ... The Plant Cell 26 (1), 195-209, 2014 | 72 | 2014 |
| Arabidopsis JAGGED links floral organ patterning to tissue growth by repressing Kip-related cell cycle inhibitors K Schiessl, JM Muiño, R Sablowski Proceedings of the National Academy of Sciences 111 (7), 2830-2835, 2014 | 70 | 2014 |
| FRUITFULL controls SAUR10 expression and regulates Arabidopsis growth and architecture M Bemer, H van Mourik, JM Muiño, C Ferrándiz, K Kaufmann, ... Journal of experimental botany 68 (13), 3391-3403, 2017 | 41 | 2017 |
| Structural determinants of DNA recognition by plant MADS-domain transcription factors JM Muino, C Smaczniak, GC Angenent, K Kaufmann, ADJ van Dijk Nucleic acids research 42 (4), 2138-2146, 2014 | 33 | 2014 |
| AIL and HDG proteins act antagonistically to control cell proliferation A Horstman, H Fukuoka, JM Muino, L Nitsch, C Guo, P Passarinho, ... Development 142 (3), 454-464, 2015 | 28 | 2015 |
| Differences in DNA binding specificity of floral homeotic protein complexes predict organ-specific target genes C Smaczniak, JM Muiño, D Chen, GC Angenent, K Kaufmann The Plant Cell 29 (8), 1822-1835, 2017 | 26 | 2017 |
| Evolution of DNA-binding sites of a floral master regulatory transcription factor JM Muiño, S de Bruijn, A Pajoro, K Geuten, M Vingron, GC Angenent, ... Molecular biology and evolution 33 (1), 185-200, 2016 | 23 | 2016 |
| Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin E Ntini, A Louloupi, J Liz, JM Muino, A Marsico, UAV Ørom Nature communications 9 (1), 1-16, 2018 | 19 | 2018 |
| PRI-CAT: a web-tool for the analysis, storage and visualization of plant ChIP-seq experiments JM Muino, M Hoogstraat, RCHJ van Ham, ADJ Van Dijk Nucleic acids research 39 (suppl_2), W524-W527, 2011 | 18 | 2011 |
| GS-distributions: A new family of distributions for continuous unimodal variables JM Muino, EO Voit, A Sorribas Computational statistics & data analysis 50 (10), 2769-2798, 2006 | 17 | 2006 |
| Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks JP Mallm, M Iskar, N Ishaque, LC Klett, SJ Kugler, JM Muino, VB Teif, ... Molecular systems biology 15 (5), e8339, 2019 | 16 | 2019 |
