Joseph M Dale

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	All	Since 2016
Citations	2387	483
h-index	6	6
i10-index	6	5

280

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20042005200620072008200920102011201220132014201520162017201820192020202169 123 107 118 95 85 133 213 274 222 231 166 130 99 113 65 58 18

Co-authors

Peter D. KarpDirector of the Bioinformatics Research Group, SRI InternationalVerified email at ai.sri.com
Tomer AltmanSenior Bioinformaticist, Whole Biome Inc.; Researcher, Stanford UniversityVerified email at me.tomeraltman.net
Suzanne PaleySRI InternationalVerified email at ai.sri.com
Mario LatendresseSRI InternationalVerified email at sri.com
Ron CaspiSRI InternationalVerified email at sri.com
Ian PaulsenProfessor, Macquarie UniversityVerified email at mq.edu.au
Aaron SpauldingSRI InternationalVerified email at ai.sri.com
Lukas A. MuellerBoyce Thompson Institute for Plant ResearchVerified email at cornell.edu
Shiaulou YuanAssistant Professor of Medicine, Massachusetts General Hospital and Harvard Medical SchoolVerified email at mgh.harvard.edu
Luciana FerrerInstituto en Ciencias de la Computación (Computer Science Institute), UBA-CONICETVerified email at dc.uba.ar

Joseph M Dale

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bioinformatics computational biology genomics systems biology machine learning


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Empirical analysis of transcriptional activity in the Arabidopsis genome K Yamada, J Lim, JM Dale, H Chen, P Shinn, CJ Palm, AM Southwick, ... Science 302 (5646), 842-846, 2003	1010	2003
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases R Caspi, T Altman, JM Dale, K Dreher, CA Fulcher, F Gilham, P Kaipa, ... Nucleic acids research 38 (suppl_1), D473-D479, 2010	522	2010
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology PD Karp, SM Paley, M Krummenacker, M Latendresse, JM Dale, TJ Lee, ... Briefings in bioinformatics 11 (1), 40-79, 2010	517	2010
Machine learning methods for metabolic pathway prediction JM Dale, L Popescu, PD Karp BMC bioinformatics 11 (1), 1-14, 2010	177	2010
Identification of inhibitors of auxin transcriptional activation by means of chemical genetics in Arabidopsis JI Armstrong, S Yuan, JM Dale, VN Tanner, A Theologis Proceedings of the National Academy of Sciences 101 (41), 14978-14983, 2004	129	2004
A systematic study of genome context methods: calibration, normalization and combination L Ferrer, JM Dale, PD Karp BMC bioinformatics 11 (1), 1-24, 2010	32	2010
Multiple-species Network-based Protein Classification JM Dale University of California, Berkeley with the University of California, San …, 2008		2008
The Pathway Tools Software in 2009 PD Karp, SM Paley, M Krummenacker, M Latendresse, JM Dale, T Lee, ...

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