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| GRAMM-X public web server for protein–protein docking A Tovchigrechko, IA Vakser Nucleic acids research 34 (suppl_2), W310-W314, 2006 | 833 | 2006 |
| CAPRI: a critical assessment of predicted interactions J Janin, K Henrick, J Moult, LT Eyck, MJE Sternberg, S Vajda, I Vakser, ... Proteins: Structure, Function, and Bioinformatics 52 (1), 2-9, 2003 | 785 | 2003 |
| Residue frequencies and pairing preferences at protein–protein interfaces F Glaser, DM Steinberg, IA Vakser, N Ben‐Tal Proteins: Structure, Function, and Bioinformatics 43 (2), 89-102, 2001 | 478 | 2001 |
| Identification of the binding site on cytochrome P450 2B4 for cytochrome b 5 and cytochrome P450 reductase A Bridges, L Gruenke, YT Chang, IA Vakser, G Loew, L Waskell Journal of Biological Chemistry 273 (27), 17036-17049, 1998 | 333 | 1998 |
| Protein-protein docking: From interaction to interactome IA Vakser Biophysical journal 107 (8), 1785-1793, 2014 | 320 | 2014 |
| Protein docking for low-resolution structures IA Vakser Protein Engineering, Design and Selection 8 (4), 371-378, 1995 | 314 | 1995 |
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| Templates are available to model nearly all complexes of structurally characterized proteins PJ Kundrotas, Z Zhu, J Janin, IA Vakser Proceedings of the National Academy of Sciences 109 (24), 9438-9441, 2012 | 221 | 2012 |
| A systematic study of low-resolution recognition in protein–protein complexes IA Vakser, OG Matar, CF Lam Proceedings of the National Academy of Sciences 96 (15), 8477-8482, 1999 | 220 | 1999 |
| Development and testing of an automated approach to protein docking A Tovchigrechko, IA Vakser Proteins: Structure, Function, and Bioinformatics 60 (2), 296-301, 2005 | 196 | 2005 |
| Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 166 | 2016 |
| Evaluation of GRAMM low‐resolution docking methodology on the hemagglutinin‐antibody complex IA Vakser Proteins: Structure, Function, and Bioinformatics 29 (S1), 226-230, 1997 | 157 | 1997 |
| Low‐resolution docking: prediction of complexes for underdetermined structures IA Vakser Biopolymers 39 (3), 455-464, 1996 | 156 | 1996 |
| Docking of protein models A Tovchigrechko, CA Wells, IA Vakser Protein Science 11 (8), 1888-1896, 2002 | 127 | 2002 |
| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 117 | 2019 |
| Dockground resource for studying protein–protein interfaces D Douguet, HC Chen, A Tovchigrechko, IA Vakser Bioinformatics 22 (21), 2612-2618, 2006 | 107 | 2006 |
| How common is the funnel‐like energy landscape in protein‐protein interactions? A Tovchigrechko, IA Vakser Protein science 10 (8), 1572-1583, 2001 | 107 | 2001 |
| Docking by structural similarity at protein‐protein interfaces R Sinha, PJ Kundrotas, IA Vakser Proteins: Structure, Function, and Bioinformatics 78 (15), 3235-3241, 2010 | 102 | 2010 |
| The structure of the BfrB–Bfd complex reveals protein–protein interactions enabling iron release from bacterioferritin H Yao, Y Wang, S Lovell, R Kumar, AM Ruvinsky, KP Battaile, IA Vakser, ... Journal of the American Chemical Society 134 (32), 13470-13481, 2012 | 94 | 2012 |
Petras KundrotasVerified email at ku.edu
