Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution CD Arnold, D Gerlach, D Spies, JA Matts, YA Sytnikova, M Pagani, ... Nature genetics 46 (7), 685-692, 2014 | 186 | 2014 |
Comparative analysis of differential gene expression tools for RNA sequencing time course data D Spies, PF Renz, TA Beyer, C Ciaudo Briefings in bioinformatics 20 (1), 288-298, 2017 | 117 | 2017 |
Dynamics in transcriptomics: advancements in RNA-seq time course and downstream analysis D Spies, C Ciaudo Computational and structural biotechnology journal 13, 469-477, 2015 | 102 | 2015 |
Monitoring the 5′ UTR landscape reveals isoform switches to drive translational efficiencies in cancer R Weber, U Ghoshdastider, D Spies, C Duré, F Valdivia-Francia, M Forny, ... Oncogene 42 (9), 638-650, 2023 | 16 | 2023 |
Raised activity of L-type calcium channels renders neurons prone to form paroxysmal depolarization shifts L Rubi, U Schandl, M Lagler, P Geier, D Spies, KD Gupta, S Boehm, ... NeuroMolecular Medicine 15, 476-492, 2013 | 14 | 2013 |
SERPINB7 expression predicts poor pancreatic cancer survival upon gemcitabine treatment D Bianconi, M Herac, D Spies, M Kieler, R Brettner, M Unseld, ... Translational oncology 12 (1), 15-23, 2019 | 12 | 2019 |
A multi‐scale study of the dominant catchment characteristics impacting low‐flow metrics MG Floriancic, D Spies, IHJ Van Meerveld, P Molnar Hydrological Processes 36 (1), e14462, 2022 | 11 | 2022 |
Biochemical and genetic predictors of overall survival in patients with metastatic pancreatic cancer treated with capecitabine and nab-paclitaxel D Bianconi, G Heller, D Spies, M Herac, A Gleiss, S Liebmann-Reindl, ... Scientific reports 7 (1), 4851, 2017 | 7 | 2017 |
Inhibition of FGF and TGF-β Pathways in hESCs Identify STOX2 as a Novel SMAD2/4 Cofactor PF Renz, D Spies, P Tsikrika, A Wutz, TA Beyer, C Ciaudo Biology 9 (12), 470, 2020 | 5 | 2020 |
Global and precise identification of functional miRNA targets in mESCs by integrative analysis M Schaefer, A Nabih, D Spies, V Hermes, M Bodak, H Wischnewski, ... EMBO reports 23 (9), e54762, 2022 | 3 | 2022 |
Argonaute proteins regulate a specific network of genes through KLF4 in mouse embryonic stem cells M Müller, M Schaefer, T Fäh, D Spies, V Hermes, RP Ngondo, ... Stem Cell Reports 17 (5), 1070-1080, 2022 | 2 | 2022 |
Inhibition of asparagine synthetase effectively retards polycystic kidney disease progression S Clerici, C Podrini, D Stefanoni, G Distefano, L Cassina, ME Steidl, ... EMBO Molecular Medicine, 1-25, 2024 | | 2024 |
Adding Another Dimension: Computational Analysis of Temporal and Integrative Datasets to Dissect Early Embryonic Developmental Deficiencies of RNAi Mutants D Spies ETH Zurich, 2018 | | 2018 |
Conservation and divergence of enhancer function across five Drosophila species D Spies | | |