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Daniel Utter
Daniel Utter
Verified email at caltech.edu
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Cited by
Cited by
Year
Individuality, stability, and variability of the plaque microbiome
DR Utter, JL Mark Welch, Jessica L, GG Borisy
Frontiers in Microbiology 7, 2016
942016
A few Pseudomonas oligotypes dominate in the meat and dairy processing environment
G Stellato, DR Utter, A Voorhis, M De Angelis, AM Eren, D Ercolini
Frontiers in microbiology 8, 264, 2017
872017
Metapangenomics of the oral microbiome provides insights into habitat adaptation and cultivar diversity
DR Utter, GG Borisy, AM Eren, CM Cavanaugh, JL Mark Welch
Genome biology 21 (1), 1-25, 2020
592020
Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation
O Chipashvili, DR Utter, JK Bedree, Y Ma, F Schulte, G Mascarin, ...
Cell Host & Microbe 29 (11), 1649-1662. e7, 2021
502021
Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping.
MW JL, DR Utter, BJ Rossetti, MW DB, AM Eren, GG Borisy
Frontiers in Microbiology 5, 568-568, 2014
43*2014
The saccharibacterium TM7x elicits differential responses across its host range
DR Utter, X He, CM Cavanaugh, JS McLean, B Bor
The ISME Journal 14 (12), 3054-3067, 2020
352020
Acquisition of the arginine deiminase system benefits epiparasitic Saccharibacteria and their host bacteria in a mammalian niche environment
J Tian, DR Utter, L Cen, PT Dong, W Shi, B Bor, M Qin, JS McLean, X He
Proceedings of the National Academy of Sciences 119 (2), e2114909119, 2022
332022
Multiple integrated metabolic strategies allow foraminiferan protists to thrive in anoxic marine sediments
F Gomaa, DR Utter, C Powers, DJ Beaudoin, VP Edgcomb, HL Filipsson, ...
Science Advances 7 (22), eabf1586, 2021
232021
Strain-Level Variation and Diverse Host Bacterial Responses in Episymbiotic Saccharibacteria
J Nie, DR Utter, KA Kerns, EI Lamont, EL Hendrickson, J Liu, T Wu, X He, ...
mSystems, e01488-21, 2022
72022
Exploring the protist microbiome: The diversity of bacterial communities associated with Arcella spp.(Tubulina: Amoebozoa)
F Gomaa, DR Utter, W Loo, DJG Lahr, CM Cavanaugh
European Journal of Protistology 82, 125861, 2022
52022
A family of contact-dependent nuclease effectors contain an exchangeable, species-identifying domain
D Sirias, DR Utter, KA Gibbs
bioRxiv, 2020.02. 20.956912, 2020
42020
Two canonically aerobic foraminifera express distinct peroxisomal and mitochondrial metabolisms
C Powers, F Gomaa, EB Billings, D Utter, D Beaudoin, VP Edgcomb, ...
bioRxiv, 2022.07. 20.500910, 2022
22022
Genome-Centric Dynamics Shape the Diversity of Oral Bacterial Populations
DR Utter, CM Cavanaugh, GG Borisy
Mbio 13 (6), e02414-22, 2022
12022
Exploitation of a Bacterium-Encoded Lytic Transglycosylase by a Human Oral Lytic Phage To Facilitate Infection
L Cen, Y Chang, JK Bedree, Y Ma, Q Zhong, DR Utter, PT Dong, R Lux, ...
Journal of Virology 96 (17), e01063-22, 2022
12022
Gene-and genome-centric dynamics shape the diversity of oral bacterial populations
DR Utter, CM Cavanaugh, GG Borisy
bioRxiv, 2021.05. 14.444208, 2021
12021
Gifts hidden in shadowy genome islands
DR Utter, VJ Orphan
Cell 186 (1), 5-7, 2023
2023
Do Microbes from Cold Methane Seep Sediments Prefer Sulfur Redox Intermediates over Sulfate?”
EM Eitel, R Murali, DR Utter, F Wu, S Lim, SA Connon, AL Sessions, ...
Fall Meeting 2022, 2022
2022
Draft Genome Sequences of Nine “Candidatus Nanosynbacter sp. HMT-352” Strains Cultured from the Human Oral Cavity
J Liu, DR Utter, J Nie, KA Kerns, EI Lamont, EL Hendrickson, X Wang, ...
Microbiology Resource Announcements 11 (8), e00403-22, 2022
2022
Metagenomic Investigation into 300 Years of Cyanobium Population Dynamics in Mono Lake
S Salley, P Thieringer, M Weng, D Utter, D Speth, B Tully, A Sessions, ...
AGU Fall Meeting Abstracts 2021, B15K-1563, 2021
2021
Inorganic Carbon Assimilation via Chloroplasts in the Aphotic-Dwelling Kleptoplastidic Foraminifer Nonionella stella
JM Bernhard, F Gomaa, DR Utter, Y Zhang
Ocean Sciences Meeting 2020, 2020
2020
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Articles 1–20