Anthony Mathelier
Anthony Mathelier
Group Leader, Centre for Molecular Medicine Norway (NCMM), University of Oslo and Oslo University
Geverifieerd e-mailadres voor ncmm.uio.no - Homepage
TitelGeciteerd doorJaar
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
A Mathelier, X Zhao, AW Zhang, F Parcy, R Worsley-Hunt, DJ Arenillas, ...
Nucleic acids research 42 (D1), D142-D147, 2013
9272013
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
A Mathelier, O Fornes, DJ Arenillas, C Chen, G Denay, J Lee, W Shi, ...
Nucleic acids research 44 (D1), D110-D115, 2015
6912015
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ...
Nature 507 (7493), 462, 2014
6892014
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ...
Nucleic acids research 46 (D1), D260-D266, 2017
4162017
MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data
A Mathelier, A Carbone
Bioinformatics 26 (18), 2226-2234, 2010
1312010
The next generation of transcription factor binding site prediction
A Mathelier, WW Wasserman
PLoS computational biology 9 (9), e1003214, 2013
1302013
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Ċström, ...
Nature biotechnology 35 (9), 872, 2017
1082017
TFBSshape: a motif database for DNA shape features of transcription factor binding sites
L Yang, T Zhou, I Dror, A Mathelier, WW Wasserman, R Gordân, R Rohs
Nucleic acids research 42 (D1), D148-D155, 2013
882013
DNA shape features improve transcription factor binding site predictions in vivo
A Mathelier, B Xin, TP Chiu, L Yang, R Rohs, WW Wasserman
Cell systems 3 (3), 278-286. e4, 2016
662016
Identification of altered cis-regulatory elements in human disease
A Mathelier, W Shi, WW Wasserman
Trends in Genetics 31 (2), 67-76, 2015
662015
ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments
J Chèneby, M Gheorghe, M Artufel, A Mathelier, B Ballester
Nucleic acids research 46 (D1), D267-D275, 2017
492017
Large scale chromosomal mapping of human microRNA structural clusters
A Mathelier, A Carbone
Nucleic acids research 41 (8), 4392-4408, 2013
462013
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals
M Lizio, J Harshbarger, I Abugessaisa, S Noguchi, A Kondo, J Severin, ...
Nucleic acids research, gkw995, 2016
452016
Intervene: a tool for intersection and visualization of multiple gene or genomic region sets
A Khan, A Mathelier
BMC bioinformatics 18 (1), 287, 2017
442017
Cis-regulatory somatic mutations and gene-expression alteration in B-cell lymphomas
A Mathelier, C Lefebvre, AW Zhang, DJ Arenillas, J Ding, WW Wasserman, ...
Genome biology 16 (1), 84, 2015
322015
Chromosomal periodicity and positional networks of genes in Escherichia coli
A Mathelier, A Carbone
Molecular systems biology 6 (1), 2010
312010
DNA methylation at enhancers identifies distinct breast cancer lineages
T Fleischer, X Tekpli, A Mathelier, S Wang, D Nebdal, HP Dhakal, ...
Nature communications 8 (1), 1379, 2017
292017
Evaluating the impact of single nucleotide variants on transcription factor binding
W Shi, O Fornes, A Mathelier, WW Wasserman
Nucleic acids research 44 (21), 10106-10116, 2016
262016
DNA methylation profiling in human Huntington's disease brain
RAG De Souza, SA Islam, LM McEwen, A Mathelier, A Hill, SM Mah, ...
Human molecular genetics 25 (10), 2013-2030, 2016
242016
Improving analysis of transcription factor binding sites within ChIP-Seq data based on topological motif enrichment
RW Hunt, A Mathelier, L Del Peso, WW Wasserman
BMC genomics 15 (1), 472, 2014
242014
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Artikelen 1–20