Pete Skene
Pete Skene
Damon Runyon Postdoctoral Research Fellow, Fred Hutchinson Cancer Research Center, Seattle
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CpG islands influence chromatin structure via the CpG-binding protein Cfp1
JP Thomson, PJ Skene, J Selfridge, T Clouaire, J Guy, S Webb, ARW Kerr, ...
Nature 464 (7291), 1082-1086, 2010
Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state
PJ Skene, RS Illingworth, S Webb, ARW Kerr, KD James, DJ Turner, ...
Molecular cell 37 (4), 457-468, 2010
An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites
PJ Skene, S Henikoff
Elife 6, e21856, 2017
Targeted in situ genome-wide profiling with high efficiency for low cell numbers
PJ Skene, JG Henikoff, S Henikoff
Nature protocols 13 (5), 1006, 2018
Cfp1 integrates both CpG content and gene activity for accurate H3K4me3 deposition in embryonic stem cells
T Clouaire, S Webb, P Skene, R Illingworth, A Kerr, R Andrews, JH Lee, ...
Genes & development 26 (15), 1714-1728, 2012
Histone variants in pluripotency and disease
PJ Skene, S Henikoff
Development 140 (12), 2513-2524, 2013
A temporal threshold for formaldehyde crosslinking and fixation
L Schmiedeberg, P Skene, A Deaton, A Bird
PLoS One 4 (2), e4636, 2009
The nucleosomal barrier to promoter escape by RNA polymerase II is overcome by the chromatin remodeler Chd1
PJ Skene, AE Hernandez, M Groudine, S Henikoff
Elife 3, e02042, 2014
A simple method for generating high-resolution maps of genome-wide protein binding
PJ Skene, S Henikoff
Elife 4, e09225, 2015
CpG island chromatin is shaped by recruitment of ZF-CxxC proteins
NP Blackledge, JP Thomson, PJ Skene
Cold Spring Harbor perspectives in biology 5 (11), a018648, 2013
Transcript analysis of dinoflagellate plastid gene minicircles
RER Nisbet, RG Hiller, ER Barry, P Skene, AC Barbrook, CJ Howe
Protist 159 (1), 31-39, 2008
Transcriptional regulatory networks underlying gene expression changes in Huntington's disease
SA Ament, JR Pearl, JP Cantle, RM Bragg, PJ Skene, SR Coffey, ...
Molecular systems biology 14 (3), e7435, 2018
Mechanism of initiation site selection promoted by the human rhinovirus 2 internal ribosome entry site
A Kaminski, TAA Pöyry, PJ Skene, RJ Jackson
Journal of virology 84 (13), 6578-6589, 2010
DUX4-induced histone variants H3. X and H3. Y mark DUX4 target genes for expression
R Resnick, CJ Wong, DC Hamm, SR Bennett, PJ Skene, SB Hake, ...
Cell reports 29 (7), 1812-1820. e5, 2019
CUT&RUN: Targeted in situ genome-wide profiling with high efficiency for low cell numbers
PJ Skene, S Henikoff
biorxiv, 193219, 2017
Chromatin roadblocks to reprogramming 50 years on
PJ Skene, S Henikoff
BMC biology 10 (1), 1-3, 2012
Integrated single cell analysis of chromatin accessibility and cell surface markers
E Swanson, C Lord, J Reading, AT Heubeck, AK Savage, R Green, ...
biorxiv, 2020
Genome-scale transcriptional regulatory network models for the mouse and human striatum predict roles for SMAD3 and other transcription factors in Huntington’s disease
SA Ament, JR Pearl, RM Bragg, PJ Skene, SR Coffey, DE Bergey, ...
bioRxiv, 087114, 2016
TEA-seq: a trimodal assay for integrated single cell measurement of transcription, epitopes, and chromatin accessibility
E Swanson, C Lord, J Reading, AT Heubeck, AK Savage, R Green, X Li, ...
bioRxiv, 2020
The role of MeCP2 in the brain: IL 1.1-1
A Bird, P Skene, R Illingworth, J Guy
The Febs Journal 276, 2009
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