| Bioinformatic and statistical analysis of adaptive immune repertoires V Greiff, E Miho, U Menzel, ST Reddy Trends in immunology 36 (11), 738-749, 2015 | 107 | 2015 |
| A bioinformatic framework for immune repertoire diversity profiling enables detection of immunological status V Greiff, P Bhat, SC Cook, U Menzel, W Kang, ST Reddy Genome medicine 7 (1), 1-15, 2015 | 101 | 2015 |
| Computational strategies for dissecting the high-dimensional complexity of adaptive immune repertoires E Miho, A Yermanos, CR Weber, CT Berger, ST Reddy, V Greiff Frontiers in immunology 9, 224, 2018 | 80 | 2018 |
| Systems analysis reveals high genetic and antigen-driven predetermination of antibody repertoires throughout B cell development V Greiff, U Menzel, E Miho, C Weber, R Riedel, S Cook, A Valai, T Lopes, ... Cell reports 19 (7), 1467-1478, 2017 | 78 | 2017 |
| Adaptive immune receptor repertoire community recommendations for sharing immune-repertoire sequencing data F Rubelt, CE Busse, SAC Bukhari, JP Bürckert, E Mariotti-Ferrandiz, ... Nature immunology 18 (12), 1274-1278, 2017 | 76 | 2017 |
| Learning the high-dimensional immunogenomic features that predict public and private antibody repertoires V Greiff, CR Weber, J Palme, U Bodenhofer, E Miho, U Menzel, ST Reddy The Journal of Immunology 199 (8), 2985-2997, 2017 | 55 | 2017 |
| Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice V Greiff, U Menzel, U Haessler, SC Cook, S Friedensohn, TA Khan, ... BMC immunology 15 (1), 1-14, 2014 | 51 | 2014 |
| Comprehensive evaluation and optimization of amplicon library preparation methods for high-throughput antibody sequencing U Menzel, V Greiff, TA Khan, U Haessler, I Hellmann, S Friedensohn, ... PloS one 9 (5), e96727, 2014 | 48 | 2014 |
| Large-scale network analysis reveals the sequence space architecture of antibody repertoires E Miho, V Greiff, ST Reddy Nature communications 10 (1), 1-11, 2019 | 40* | 2019 |
| High-throughput antibody engineering in mammalian cells by CRISPR/Cas9-mediated homology-directed mutagenesis DM Mason, CR Weber, C Parola, SM Meng, V Greiff, WJ Kelton, ... Nucleic acids research 46 (14), 7436-7449, 2018 | 31 | 2018 |
| Resident memory CD8 T cells persist for years in human small intestine R Bartolomé-Casado, OJB Landsverk, SK Chauhan, L Richter, D Phung, ... Journal of Experimental Medicine 216 (10), 2412-2426, 2019 | 29 | 2019 |
| Inferred allelic variants of immunoglobulin receptor genes: a system for their evaluation, documentation, and naming M Ohlin, C Scheepers, M Corcoran, WD Lees, CE Busse, D Bagnara, ... Frontiers in immunology 10, 435, 2019 | 28 | 2019 |
| Augmenting adaptive immunity: progress and challenges in the quantitative engineering and analysis of adaptive immune receptor repertoires AJ Brown, I Snapkov, R Akbar, M Pavlović, E Miho, GK Sandve, V Greiff Molecular Systems Design & Engineering 4 (4), 701-736, 2019 | 23 | 2019 |
| Comparison of methods for phylogenetic B-cell lineage inference using time-resolved antibody repertoire simulations (AbSim) A Yermanos, V Greiff, NJ Krautler, U Menzel, A Dounas, E Miho, ... Bioinformatics 33 (24), 3938-3946, 2017 | 17 | 2017 |
| Hopfield networks is all you need H Ramsauer, B Schäfl, J Lehner, P Seidl, M Widrich, L Gruber, ... arXiv preprint arXiv:2008.02217, 2020 | 13 | 2020 |
| A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding R Akbar, PA Robert, M Pavlović, JR Jeliazkov, I Snapkov, A Slabodkin, ... bioRxiv, 759498, 2019 | 12* | 2019 |
| Risk factors for pneumocystis pneumonia in giant cell arteritis: a single-centre cohort study CT Berger, V Greiff, S John, KF Koenig, MB Bigler, M Recher, C Hess, ... Clin Exp Rheumatol 33 (2 Suppl 89), 122, 2015 | 12 | 2015 |
| A minimal model of peptide binding predicts ensemble properties of serum antibodies V Greiff, H Redestig, J Luck, N Bruni, A Valai, S Hartmann, S Rausch, ... BMC Genomics 13 (1), 79, 2012 | 12 | 2012 |
| immuneSIM: tunable multi-feature simulation of B-and T-cell receptor repertoires for immunoinformatics benchmarking CR Weber, R Akbar, A Yermanos, M Pavlović, I Snapkov, GK Sandve, ... Bioinformatics 36 (11), 3594-3596, 2020 | 11 | 2020 |
| Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences E Smakaj, L Babrak, M Ohlin, M Shugay, B Briney, D Tosoni, C Galli, ... Bioinformatics 36 (6), 1731-1739, 2020 | 9 | 2020 |
Sai T. ReddyAssociate Professor, ETH ZurichGeverifieerd e-mailadres voor bsse.ethz.ch
