Beth Shapiro
Beth Shapiro
UC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa Cruz
Verified email at ucsc.edu
TitleCited byYear
Bayesian coalescent inference of past population dynamics from molecular sequences
AJ Drummond, A Rambaut, B Shapiro, OG Pybus
Molecular biology and evolution 22 (5), 1185-1192, 2005
23842005
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
10852014
Rise and fall of the Beringian steppe bison
B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ...
Science 306 (5701), 1561-1565, 2004
6492004
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA
HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ...
science 311 (5759), 392-394, 2006
6212006
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
B Shapiro, A Rambaut, AJ Drummond
Molecular biology and evolution 23 (1), 7-9, 2005
5882005
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ...
Nature 499 (7456), 74, 2013
5282013
Diverse plant and animal genetic records from Holocene and Pleistocene sediments
E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ...
Science 300 (5620), 791-795, 2003
5232003
Species-specific responses of Late Quaternary megafauna to climate and humans
ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ...
Nature 479 (7373), 359, 2011
4602011
Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs
O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ...
Science 342 (6160), 871-874, 2013
3792013
Dynamics of Pleistocene population extinctions in Beringian brown bears
I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper
Science 295 (5563), 2267-2270, 2002
3662002
Skyline‐plot methods for estimating demographic history from nucleotide sequences
SYW Ho, B Shapiro
Molecular ecology resources 11 (3), 423-434, 2011
3332011
Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis
MR Farhat, BJ Shapiro, KJ Kieser, R Sultana, KR Jacobson, TC Victor, ...
Nature genetics 45 (10), 1183, 2013
2932013
The earliest evidence for anatomically modern humans in northwestern Europe
T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ...
Nature 479 (7374), 521, 2011
2892011
Evidence for time dependency of molecular rate estimates
SYW Ho, B Shapiro, MJ Phillips, A Cooper, AJ Drummond
Systematic biology 56 (3), 515-522, 2007
2632007
Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs
CJ Edwards, R Bollongino, A Scheu, A Chamberlain, A Tresset, JD Vigne, ...
Proceedings of the Royal Society B: Biological Sciences 274 (1616), 1377-1385, 2007
2612007
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci
MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard
Molecular biology and evolution 30 (3), 713-724, 2012
2282012
The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis
G Magiorkinis, E Magiorkinis, D Paraskevis, SYW Ho, B Shapiro, ...
PLoS medicine 6 (12), e1000198, 2009
2092009
The effect of inappropriate calibration: three case studies in molecular ecology
SYW Ho, U Saarma, R Barnett, J Haile, B Shapiro
PLoS One 3 (2), e1615, 2008
2032008
Ancient hybridization and an Irish origin for the modern polar bear matriline
CJ Edwards, MA Suchard, P Lemey, JJ Welch, I Barnes, TL Fulton, ...
Current Biology 21 (15), 1251-1258, 2011
1932011
Phylogeography of lions (Panthera leo ssp.) reveals three distinct taxa and a late Pleistocene reduction in genetic diversity
R Barnett, B Shapiro, IAN Barnes, SYW Ho, J Burger, N Yamaguchi, ...
Molecular ecology 18 (8), 1668-1677, 2009
1892009
The system can't perform the operation now. Try again later.
Articles 1–20