A dynamic programming based reduction procedure for the multidimensional 0–1 knapsack problem S Balev, N Yanev, A Fréville, R Andonov European journal of operational research 186 (1), 63-76, 2008 | 95 | 2008 |

Optimal semi-oblique tiling R Andonov, S Balev, S Rajopadhye, N Yanev Proceedings of the thirteenth annual ACM symposium on Parallel algorithms …, 2001 | 76 | 2001 |

A hybrid algorithm for the unbounded knapsack problem V Poirriez, N Yanev, R Andonov Discrete Optimization 6 (1), 110-124, 2009 | 68 | 2009 |

Maximum contact map overlap revisited R Andonov, N Malod-Dognin, N Yanev Journal of Computational Biology 18 (1), 27-41, 2011 | 63 | 2011 |

Protein threading: From mathematical models to parallel implementations R Andonov, S Balev, N Yanev INFORMS Journal on Computing 16 (4), 393-405, 2004 | 41 | 2004 |

Maximum cliques in protein structure comparison N Malod-Dognin, R Andonov, N Yanev Experimental Algorithms: 9th International Symposium, SEA 2010, Ischia …, 2010 | 38 | 2010 |

A combinatorial approach to the classification problem N Yanev, S Balev European Journal of Operational Research 115 (2), 339-350, 1999 | 36 | 1999 |

An efficient lagrangian relaxation for the contact map overlap problem R Andonov, N Yanev, N Malod-Dognin Algorithms in Bioinformatics: 8th International Workshop, WABI 2008 …, 2008 | 31 | 2008 |

Optimal orthogonal tiling R Andonov, S Rajopadhye, N Yanev Euro-Par 98, 480-490, 1998 | 31 | 1998 |

Solving the protein threading problem in parallel N Yanev, R Andonov Proceedings International Parallel and Distributed Processing Symposium, 8 pp., 2003 | 21 | 2003 |

Parallel divide and conquer approach for the protein threading problem N Yanev, R Andonov Concurrency and Computation: Practice and Experience 16 (9), 961-974, 2004 | 19 | 2004 |

A new heuristic algorithm for protein folding in the HP model M Traykov, S Angelov, N Yanev Journal of computational biology 23 (8), 662-668, 2016 | 18 | 2016 |

Protein folding prediction in a cubic lattice in hydrophobic-polar model N Yanev, M Traykov, P Milanov, B Yurukov Journal of Computational Biology 24 (5), 412-421, 2017 | 16 | 2017 |

Optimal protein threading by cost-splitting P Veber, N Yanev, R Andonov, V Poirriez WABI, 365-375, 2005 | 15 | 2005 |

Integer programming approach to HP folding N Yanev, P Milanov, I Mirchev Serdica Journal of Computing 5 (4), 359p-366p, 2011 | 9 | 2011 |

Lagrangian approaches for a class of matching problems in computational biology N Yanev, R Andonov, P Veber, S Balev Computers & Mathematics with Applications 55 (5), 1054-1067, 2008 | 8 | 2008 |

Classification using graph partitioning V Valev, N Yanev Proceedings of the 21st International Conference on Pattern Recognition …, 2012 | 7 | 2012 |

Local protein threading by mixed integer programming G Collet, R Andonov, N Yanev, JF Gibrat Discrete Applied Mathematics 159 (16), 1707-1716, 2011 | 7 | 2011 |

Tabu search approaches for solving the two-group classification problem S Hanafi, N Yanev Annals of Operations Research 183, 25-46, 2011 | 7 | 2011 |

First steps towards optimal oblique tile sizing R Andonov, P Calland, S Niar, S Rajopadhye, N Yanev Proceedings of the 8th International Workshop on Compilers for Parallel …, 2000 | 7 | 2000 |