Fan Shi
Fan Shi
DEDJTR Victorian Government
Geverifieerd e-mailadres voor ecodev.vic.gov.au
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Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome
F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere, P Kay, K Forrest, A Fritz, ...
Nature genetics 51 (5), 896-904, 2019
762019
GWIS-model-free, fast and exhaustive search for epistatic interactions in case-control GWAS
B Goudey, D Rawlinson, Q Wang, F Shi, H Ferra, RM Campbell, L Stern, ...
BMC genomics 14 (3), 1-18, 2013
732013
Development and validation of a gene expression tumour classifier for cancer of unknown primary
RW Tothill, F Shi, L Paiman, J Bedo, A Kowalczyk, L Mileshkin, E Buela, ...
Pathology 47 (1), 7-12, 2015
262015
Genomic prediction using prior quantitative trait loci information reveals a large reservoir of underutilised blackleg resistance in diverse canola (Brassica napus L.) lines
M Fikere, DM Barbulescu, MM Malmberg, F Shi, JCO Koh, AT Slater, ...
The plant genome 11 (2), 170100, 2018
182018
Interactions within the MHC contribute to the genetic architecture of celiac disease
B Goudey, G Abraham, E Kikianty, Q Wang, D Rawlinson, F Shi, I Haviv, ...
PloS one 12 (3), e0172826, 2017
172017
GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes
Q Wang, F Shi, A Kowalczyk, RM Campbell, B Goudey, D Rawlinson, ...
2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2014
172014
Diversity and genome analysis of Australian and global oilseed Brassica napus L. germplasm using transcriptomics and whole genome re-sequencing
MM Malmberg, F Shi, GC Spangenberg, HD Daetwyler, NOI Cogan
Frontiers in plant science 9, 508, 2018
152018
Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plants
Z Lin, F Shi, BJ Hayes, HD Daetwyler
Theoretical and applied genetics 130 (5), 969-980, 2017
152017
Exome sequence genotype imputation in globally diverse hexaploid wheat accessions
F Shi, J Tibbits, RK Pasam, P Kay, D Wong, J Petkowski, KL Forrest, ...
Theoretical and Applied Genetics 130 (7), 1393-1404, 2017
112017
Using sensors and unmanned aircraft systems for high-throughput phenotyping of biomass in perennial ryegrass breeding trials
J Wang, P Badenhorst, A Phelan, L Pembleton, F Shi, N Cogan, ...
Frontiers in plant science 10, 1381, 2019
102019
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
F Shi, C Leckie, G MacIntyre, I Haviv, A Boussioutas, A Kowalczyk
BMC bioinformatics 11 (1), 1-10, 2010
62010
Genome-wide association reveals a complex architecture for rust resistance in 2300 worldwide bread wheat accessions screened under various Australian conditions
R Joukhadar, G Hollaway, F Shi, S Kant, K Forrest, D Wong, J Petkowski, ...
Theoretical and Applied Genetics 133 (9), 2695-2712, 2020
52020
Meta-analysis of gene expression microarrays with missing replicates
F Shi, G Abraham, C Leckie, I Haviv, A Kowalczyk
BMC bioinformatics 12 (1), 1-16, 2011
52011
Development of a histology-guided gene expression tumor classifier for cancer of unknown primary (CUP).
LR Mileshkin, K Byron, R Tothill, F Shi, L Paiman, J Bedo, A Kowalczyk, ...
Journal of Clinical Oncology 32 (15_suppl), 11108-11108, 2014
32014
Applications of Class-Conditional Conformal Predictor in Multi-Class Classification
F Shi, CS Ong, C Leckie
2013 12th International Conference on Machine Learning and Applications 1 …, 2013
32013
Development and Validation of a Phenotyping Computational Workflow to Predict the Biomass Yield of a Large Perennial Ryegrass Breeding Field Trial
A Gebremedhin, P Badenhorst, J Wang, F Shi, E Breen, K Giri, ...
Frontiers in plant science 11, 689, 2020
22020
Precision Medicine: Dawn of Supercomputing in ‘omics Research
M Reumann, KE Holt, M Inouye, T Stinear, B Goudey, G Abraham, ...
eResearch Australasia, 2011
22011
Extension of a haplotype-based genomic prediction model to manage multi-environment wheat data using environmental covariates
S He, R Thistlethwaite, K Forrest, F Shi, MJ Hayden, R Trethowan, ...
Theoretical and Applied Genetics 132 (11), 3143-3154, 2019
12019
Publisher correction: exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome
F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere, P Kay, K Forrest
Nature genetics 51 (7), 1194-1195, 2019
12019
Epistasis within the MHC contributes to the genetic architecture of celiac disease
B Goudey, G Abraham, E Kikianty, Q Wang, D Rawlinson, F Shi, I Haviv, ...
BioRxiv, 002485, 2015
12015
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