Vladimir Yu. Kiselev
Vladimir Yu. Kiselev
Informatics Team Leader @ Wellcome Sanger Institute
Geverifieerd e-mailadres voor sanger.ac.uk - Homepage
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SC3: consensus clustering of single-cell RNA-seq data
VY Kiselev, K Kirschner, MT Schaub, T Andrews, A Yiu, T Chandra, ...
Nature methods 14 (5), 483-486, 2017
7252017
Challenges in unsupervised clustering of single-cell RNA-seq data
VY Kiselev, TS Andrews, M Hemberg
Nature Reviews Genetics 20 (5), 273-282, 2019
3122019
scmap: projection of single-cell RNA-seq data across data sets
VY Kiselev, A Yiu, M Hemberg
Nature methods 15 (5), 359-362, 2018
2452018
Predicting the mutations generated by repair of Cas9-induced double-strand breaks
F Allen, L Crepaldi, C Alsinet, AJ Strong, V Kleshchevnikov, P De Angeli, ...
Nature biotechnology 37 (1), 64-72, 2019
2112019
PTEN regulates PI (3, 4) P2 signaling downstream of class I PI3K
M Malek, A Kielkowska, T Chessa, KE Anderson, D Barneda, P Pir, ...
Molecular cell 68 (3), 566-580. e10, 2017
1062017
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
HuBMAP Consortium
Nature 574 (7777), 187, 2019
872019
Proliferation drives aging-related functional decline in a subpopulation of the hematopoietic stem cell compartment
K Kirschner, T Chandra, V Kiselev, D Flores-Santa Cruz, IC Macaulay, ...
Cell reports 19 (8), 1503-1511, 2017
492017
Lateral dynamics of proteins with polybasic domain on anionic membranes: a dynamic Monte-Carlo study
VY Kiselev, D Marenduzzo, AB Goryachev
Biophysical journal 100 (5), 1261-1270, 2011
392011
Tia1 dependent regulation of mRNA subcellular location and translation controls p53 expression in B cells
JUMT Manuel D. Díaz-Muñoz, Vladimir Yu. Kiselev, Nicolas Le Novère, Tomaz Curk
Nature Communications, 530, 2017
27*2017
Perturbations of PIP3 signalling trigger a global remodelling of mRNA landscape and reveal a transcriptional feedback loop
VY Kiselev, V Juvin, M Malek, N Luscombe, P Hawkins, NL Novère, ...
Nucleic acids research 43 (20), 9663-9679, 2015
212015
Comparison of visualization tools for single-cell RNAseq data
B Cakir, M Prete, N Huang, S Van Dongen, P Pir, VY Kiselev
NAR Genomics and Bioinformatics 2 (3), lqaa052, 2020
162020
Lateral dynamics of charged lipids and peripheral proteins in spatially heterogeneous membranes: Comparison of continuous and Monte Carlo approaches
VY Kiselev, M Leda, AI Lobanov, D Marenduzzo, AB Goryachev
The Journal of chemical physics 135 (15), 10B615, 2011
162011
Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data
TS Andrews, VY Kiselev, D McCarthy, M Hemberg
Nature Protocols, 1-9, 2020
122020
Publisher Correction: Challenges in unsupervised clustering of single-cell RNA-seq data.
VY Kiselev, TS Andrews, M Hemberg
Nature reviews. Genetics 20 (5), 310-310, 2019
112019
scmap-A tool for unsupervised projection of single cell RNA-seq data
VY Kiselev, M Hemberg
bioRxiv, 150292, 2017
102017
Flexible comparison of batch correction methods for single-cell RNA-seq using BatchBench
R Chazarra-Gil, S van Dongen, VY Kiselev, M Hemberg
Nucleic acids research 49 (7), e42-e42, 2021
92021
The cellular immune response to COVID-19 deciphered by single cell multi-omics across three UK centres
E Stephenson, G Reynolds, RA Botting, FJ Calero-Nieto, M Morgan, ...
medRxiv, 2021
72021
Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro
L Garcia-Alonso, LF Handfield, K Roberts, K Nikolakopoulou, ...
bioRxiv, 2021
52021
Handbook of statistical genomics
DJ Balding, I Moltke, J Marioni
John Wiley & Sons, 2019
52019
Single-cell multi-omics analysis of the immune response in COVID-19
E Stephenson, G Reynolds, RA Botting, FJ Calero-Nieto, MD Morgan, ...
Nature medicine 27 (5), 904-916, 2021
32021
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