Michael Schroeder

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Joachim HauptTU DresdenVerified email at biotec.tu-dresden.de
Sebastian SalentinBASF SEVerified email at basf.com
George TsatsaronisVice President Data Science Research Content Operations, Elsevier B.V.Verified email at elsevier.com
Melissa F. AdasmeEMBL-EBIVerified email at ebi.ac.uk
Christof WinterTechnical University of MunichVerified email at tum.de
Loic RoyerChan Zuckerberg BiohubVerified email at czbiohub.org
Dr. Thomas WächterTelekom MMSVerified email at t-systems.com
Andreas HenschelKhalifa University of Science and TechnologyVerified email at ku.ac.ae
William "Bill" AndreopoulosAssistant Professor, Computer Science, San Jose State UniversityVerified email at lbl.gov
Bingding HuangShenzhen Technology University, Shenzhen, ChinaVerified email at sztu.edu.cn
Matthias ZschunkeTransinsight GmbHVerified email at freenet.de
Jörg HakenbergIllumina, Inc.Verified email at illumina.com
Simone DaminelliJanssen R&DVerified email at its.jnj.com
Rainer WinnenburgStanford Center for Biomedical Informatics ResearchVerified email at stanford.edu
Gerd WagnerProfessor Emeritus, Brandenburg University of Technology, GermanyVerified email at b-tu.de
Robert GrützmannProfessor für ChirurgieVerified email at uk-erlangen.de
Wolfgang NejdlProfessor of Computer Science, Leibniz Universität Hannover, L3S Research Center, Hannover, GermanyVerified email at kbs.uni-hannover.de
Andrej ShevchenkoMPI of Molecular Cell Biology and Genetics, DresdenVerified email at mpi-cbg.de
Panos DafasPortfolio ManagerVerified email at alumni.doc.ic.ac.uk
Dan BolserFree ManVerified email at ebi.ac.uk

Michael Schroeder

Professor in Bioinformatics, TU Dresden

Verified email at biotec.tu-dresden.de - Homepage

Bioinformatics


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PLIP: fully automated protein–ligand interaction profiler S Salentin, S Schreiber, VJ Haupt, MF Adasme, M Schroeder Nucleic acids research 43 (W1), W443-W447, 2015	1844	2015
PLIP 2021: Expanding the scope of the protein–ligand interaction profiler to DNA and RNA MF Adasme, KL Linnemann, SN Bolz, F Kaiser, S Salentin, VJ Haupt, ... Nucleic acids research 49 (W1), W530-W534, 2021	1039	2021
GoPubMed: exploring PubMed with the gene ontology A Doms, M Schroeder Nucleic acids research 33 (suppl_2), W783-W786, 2005	700	2005
An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition G Tsatsaronis, G Balikas, P Malakasiotis, I Partalas, M Zschunke, ... BMC bioinformatics 16, 1-28, 2015	650	2015
LIGSITE^csc: predicting ligand binding sites using the Connolly surface and degree of conservation B Huang, M Schroeder BMC structural biology 6, 1-11, 2006	582	2006
A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language R Herzog, D Schwudke, K Schuhmann, JL Sampaio, SR Bornstein, ... Genome biology 12, 1-25, 2011	412	2011
LipidXplorer: a software for consensual cross-platform lipidomics R Herzog, K Schuhmann, D Schwudke, JL Sampaio, SR Bornstein, ... PloS one 7 (1), e29851, 2012	407	2012
Identification of cavities on protein surface using multiple computational approaches for drug binding site prediction Z Zhang, Y Li, B Lin, M Schroeder, B Huang Bioinformatics 27 (15), 2083-2088, 2011	363	2011
SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions S Preissner, K Kroll, M Dunkel, C Senger, G Goldsobel, D Kuzman, ... Nucleic acids research 38 (suppl_1), D237-D243, 2010	335	2010
A roadmap of clustering algorithms: finding a match for a biomedical application B Andreopoulos, A An, X Wang, M Schroeder Briefings in bioinformatics 10 (3), 297-314, 2009	332	2009
Google goes cancer: improving outcome prediction for cancer patients by network-based ranking of marker genes C Winter, G Kristiansen, S Kersting, J Roy, D Aust, T Knösel, P Rümmele, ... PLoS computational biology 8 (5), e1002511, 2012	229	2012
SCOPPI: a structural classification of protein–protein interfaces C Winter, A Henschel, WK Kim, M Schroeder Nucleic acids research 34 (suppl_1), D310-D314, 2006	211	2006
Negotiation in multi-agent systems M Beer, M d'Inverno, M Luck, N Jennings, C Preist, M Schroeder The Knowledge Engineering Review 14 (3), 285-289, 1999	208	1999
Unraveling protein networks with power graph analysis L Royer, M Reimann, B Andreopoulos, M Schroeder PLoS computational biology 4 (7), e1000108, 2008	182	2008
Drug promiscuity in PDB: protein binding site similarity is key VJ Haupt, S Daminelli, M Schroeder PLoS one 8 (6), e65894, 2013	180	2013
Old friends in new guise: repositioning of known drugs with structural bioinformatics VJ Haupt, M Schroeder Briefings in bioinformatics 12 (4), 312-326, 2011	170	2011
Market-based Resource Allocation for Grid Computing: A Model and Simulation. J Gomoluch, M Schroeder Middleware Workshops, 211-218, 2003	161	2003
Inter-species normalization of gene mentions with GNAT J Hakenberg, C Plake, R Leaman, M Schroeder, G Gonzalez Bioinformatics 24 (16), i126-i132, 2008	158	2008
Agents in bioinformatics, computational and systems biology E Merelli, G Armano, N Cannata, F Corradini, M d'Inverno, A Doms, ... Briefings in bioinformatics 8 (1), 45-59, 2007	152	2007
Polypharmacology rescored: Protein–ligand interaction profiles for remote binding site similarity assessment S Salentin, VJ Haupt, S Daminelli, M Schroeder Progress in biophysics and molecular biology 116 (2-3), 174-186, 2014	150	2014

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