An efficient metadynamics-based protocol to model the binding affinity and the transition state ensemble of G-protein-coupled receptor ligands N Saleh, P Ibrahim, G Saladino, FL Gervasio, T Clark Journal of chemical information and modeling 57 (5), 1210-1217, 2017 | 113 | 2017 |
Multiple binding sites contribute to the mechanism of mixed agonistic and positive allosteric modulators of the cannabinoid CB1 receptor N Saleh, O Hucke, G Kramer, E Schmidt, F Montel, R Lipinski, B Ferger, ... Angewandte Chemie 130 (10), 2610-2615, 2018 | 59 | 2018 |
A three‐site mechanism for agonist/antagonist selective binding to vasopressin receptors N Saleh, G Saladino, FL Gervasio, E Haensele, L Banting, DC Whitley, ... Angewandte Chemie 128 (28), 8140-8144, 2016 | 45 | 2016 |
Investigating allosteric effects on the functional dynamics of β2-adrenergic ternary complexes with enhanced-sampling simulations N Saleh, G Saladino, FL Gervasio, T Clark Chemical Science 8 (5), 4019-4026, 2017 | 36 | 2017 |
The antioxidant resveratrol acts as a non-selective adenosine receptor agonist A Sanchez-Melgar, JL Albasanz, R Guixà-González, N Saleh, J Selent, ... Free Radical Biology and Medicine 135, 261-273, 2019 | 29 | 2019 |
Identification of two distinct sites for antagonist and biased agonist binding to the human chemokine receptor CXCR3 L Milanos, N Saleh, RC Kling, J Kaindl, N Tschammer, T Clark Angewandte Chemie 128 (49), 15503-15507, 2016 | 22 | 2016 |
Differences between G-Protein-Stabilized Agonist–GPCR Complexes and their Nanobody-Stabilized Equivalents N Saleh, P Ibrahim, T Clark Angewandte Chemie International Edition, 2017 | 20 | 2017 |
Can simulations and modeling decipher NMR data for conformational equilibria? Arginine–Vasopressin E Haensele, N Saleh, CM Read, L Banting, DC Whitley, T Clark Journal of chemical information and modeling 56 (9), 1798-1807, 2016 | 15 | 2016 |
Binding, thermodynamics, and selectivity of a non-peptide antagonist to the melanocortin-4 receptor N Saleh, G Kleinau, N Heyder, T Clark, PW Hildebrand, P Scheerer Frontiers in Pharmacology 9, 560, 2018 | 11 | 2018 |
Allosteric modulation of the sarcoplasmic reticulum Ca 2+ ATPase by thapsigargin via decoupling of functional motions N Saleh, Y Wang, P Nissen, K Lindorff-Larsen Physical Chemistry Chemical Physics 21 (39), 21991-21995, 2019 | 7 | 2019 |
Molecular mechanisms of biased and probe-dependent signaling at CXC-motif chemokine receptor CXCR3 induced by negative allosteric modulators R Brox, L Milanos, N Saleh, P Baumeister, A Buschauer, D Hofmann, ... Molecular Pharmacology 93 (4), 309-322, 2018 | 7 | 2018 |
Cyanine Dye Coupling Mediates Self‐assembly of a pH Sensitive Peptide into Novel 3D Architectures R Fernandes, S Chowdhary, N Mikula, N Saleh, K Kanevche, H Berlepsch, ... Angewandte Chemie 134 (48), e202208647, 2022 | 5 | 2022 |
Exploring the free-energy landscape of carbohydrate–protein complexes: development and validation of scoring functions considering the binding-site topology S Eid, N Saleh, A Zalewski, A Vedani Journal of computer-aided molecular design 28, 1191-1204, 2014 | 4 | 2014 |
11th German Conference on Chemoinformatics (GCC 2015) U Fechner, C de Graaf, AE Torda, S Güssregen, A Evers, H Matter, ... Journal of cheminformatics 8 (1), 1-27, 2016 | 2 | 2016 |
A Multi-State Coarse-Grained Simulation Model Captures Conformational Cycling in P-Type ATPases Y Wang, N Saleh, X Chu, K Lindorff-Larsen Biophysical Journal 116 (3), 300a, 2019 | | 2019 |
Molecular mechanisms of biased and probe-dependent signaling at CXCR3 induced by negative allosteric modulators R Brox, L Milanos, N Saleh, P Baumeister, A Buschauer, D Hofmann, ... Molecular Pharmacology, 2018 | | 2018 |
Understanding the principles of GPCR selectivity by homology modeling and simulation of ternary complexes N Saleh PQDT-Global, 2016 | | 2016 |
G-Protein Coupled Receptors up Close T Clark, P Ibrahim, J Kaindl, N Saleh, RC Kling, L Milanos High Performance Computing, 240, 0 | | |