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Matthieu Leray
Matthieu Leray
Staff Scientist, Smithsonian Tropical Research Institute
Verified email at si.edu - Homepage
Title
Cited by
Cited by
Year
A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut …
M Leray, JY Yang, CP Meyer, SC Mills, N Agudelo, V Ranwez, JT Boehm, ...
Frontiers in Zoology 10 (1), 34, 2013
13532013
DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity
M Leray, N Knowlton
Proceedings of the National Academy of Sciences 112 (7), 2076–2081, 2015
5422015
Censusing marine eukaryotic diversity in the twenty-first century
M Leray, N Knowlton
Philosophical Transactions of the Royal Society B 371, 20150331, 2016
1882016
GenBank is a reliable resource for 21st century biodiversity research
M Leray, N Knowlton, SL Ho, BN Nguyen, RJ Machida
Proceedings of the National Academy of Sciences 116 (45), 22651-22656, 2019
1752019
Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples
R Machida, M Leray, SL Ho, N Knowlton
Scientific Data 4, 170027, 2017
1682017
Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding
M Leray, N Knowlton
PeerJ 5, e3006, 2017
1382017
Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly partitioned, generalist diet
M Leray, CP Meyer, SC Mills
PeerJ 3, e1047, 2015
1282015
Allopatric divergence and speciation in coral reef fish: the three-spot Dascyllus, Dascyllus trimaculatus, species complex
M Leray, R Beldade, SJ Holbrook, RJ Schmitt, S Planes, G Bernardi
Evolution 64 (5), 1218-1230, 2010
1232010
Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape
BN Nguyen, EW Shen, J Seemann, AMS Correa, JL O'Donnell, AH Altieri, ...
Scientific reports 10, 6729, 2020
1172020
Host-associated microbiomes drive structure and function of marine ecosystems
LGE Wilkins, M Leray, B Yuen, R Peixoto, TJ Pereira, HM Bik, DA Coil, ...
PLoS Biology 17 (11), e3000533, 2019
1172019
The importance of standardization for biodiversity comparisons: A case study using autonomous reef monitoring structures (ARMS) and metabarcoding to measure cryptic diversity …
E Ransome, JB Geller, M Timmers, M Leray, A Mahardini, A Sembiring, ...
PLoS One 12 (4), e0175066, 2017
1122017
Effectiveness of annealing blocking primers versus restriction enzymes for characterization of generalist diets: unexpected prey revealed in the gut contents of two coral reef …
M Leray, N Agudelo, SC Mills, CP Meyer
PloS one 8 (4), e58076, 2013
922013
Cross-shelf investigation of coral reef cryptic benthic organisms reveals diversity patterns of the hidden majority
J Pearman, M Leray, RR Villalobos, RJ Machida, ML Berumen, ...
Scientific Reports 8, 8090, 2018
822018
Trade‐offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on “Environmental DNA: What's behind the term?” by …
N Rodriguez‐Ezpeleta, O Morissette, CW Bean, S Manu, P Banerjee, ...
Molecular Ecology 30 (19), 4601-4605, 2021
812021
Moorea BIOCODE barcode library as a tool for understanding predator–prey interactions: insights into the diet of common predatory coral reef fishes
M Leray, JT Boehm, SC Mills, CP Meyer
Coral reefs 31, 383-388, 2012
722012
Rapid ecosystem-scale consequences of acute deoxygenation on a Caribbean coral reef
MD Johnson, JJ Scott, M Leray, N Lucey, LMR Bravo, WL Wied, AH Altieri
Nature communications 12 (1), 4522, 2021
712021
MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database
M Leray, SL Ho, IJ Lin, RJ Machida
Bioinformatics 34 (21), 3753–3754, 2018
672018
Complex patterns of population structure and recruitment of Plectropomus leopardus (Pisces: Epinephelidae) in the Indo-West Pacific: implications for fisheries …
L Van Herwerden, J Howard Choat, SJ Newman, M Leray, G Hillersøy
Marine biology 156, 1595-1607, 2009
662009
Acanthaster planci Outbreak: Decline in Coral Health, Coral Size Structure Modification and Consequences for Obligate Decapod Assemblages
M Leray, M Béraud, A Anker, Y Chancerelle, SC Mills
PLoS One 7 (4), e35456, 2012
592012
Housekeeping mutualisms: do more symbionts facilitate host performance?
AC Stier, MA Gil, CS McKeon, S Lemer, M Leray, SC Mills, CW Osenberg
PLoS One 7 (4), e32079, 2012
562012
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Articles 1–20