Cedric Laczny
Cedric Laczny
Eco-Systems Biology group, LCSB, University of Luxembourg
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VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
Microbiome 3 (1), 1, 2015
151*2015
Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes
A Heintz-Buschart, P May, CC Laczny, LA Lebrun, C Bellora, A Krishna, ...
Nature microbiology 2 (1), 1-13, 2016
1362016
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
1122017
Alignment-free visualization of metagenomic data by nonlinear dimension reduction
CC Laczny, N Pinel, N Vlassis, P Wilmes
Scientific reports 4, 4516, 2014
632014
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 1-10, 2014
602014
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ...
Genome biology 17 (1), 1-21, 2016
572016
miRTrail-a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases
C Laczny, P Leidinger, J Haas, N Ludwig, C Backes, A Gerasch, ...
BMC bioinformatics 13 (1), 36, 2012
432012
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ...
npj Biofilms and Microbiomes 1 (1), 1-11, 2015
422015
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation
CC Laczny, C Kiefer, V Galata, T Fehlmann, C Backes, A Keller
Nucleic acids research 45 (W1), W171-W179, 2017
362017
Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires
E Bauer, CC Laczny, S Magnusdottir, P Wilmes, I Thiele
Microbiome 3 (1), 1-13, 2015
282015
Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation
A Kaysen, A Heintz-Buschart, EEL Muller, S Narayanasamy, L Wampach, ...
Translational Research 186, 79-94. e1, 2017
162017
Assessing the heterogeneity of in silico plasmid predictions based on whole-genome-sequenced clinical isolates
CC Laczny, V Galata, A Plum, AE Posch, A Keller
Briefings in bioinformatics 20 (3), 857-865, 2019
112019
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life. Front Microbiol 8: 738
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
112017
Identification, recovery, and refinement of hitherto undescribed population-level genomes from the human gastrointestinal tract
CC Laczny, EEL Muller, A Heintz-Buschart, M Herold, LA Lebrun, ...
Frontiers in microbiology 7, 884, 2016
82016
Comparison of initial oral microbiomes of young adults with and without cavitated dentin caries lesions using an in situ biofilm model
S Rupf, CC Laczny, V Galata, C Backes, A Keller, N Umanskaya, A Erol, ...
Scientific reports 8 (1), 1-10, 2018
72018
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
EEL Muller, S Narayanasamy, M Zeimes, CC Laczny, LA Lebrun, ...
Standards in Genomic Sciences 12 (1), 64, 2017
62017
Comparing genome versus proteome-based identification of clinical bacterial isolates
V Galata, C Backes, CC Laczny, G Hemmrich-Stanisak, H Li, L Smoot, ...
Briefings in bioinformatics 19 (3), 495-505, 2018
52018
Integrating culture-based antibiotic resistance profiles with whole-genome sequencing data for 11,087 clinical isolates
V Galata, CC Laczny, C Backes, G Hemmrich-Stanisak, S Schmolke, ...
Genomics, proteomics & bioinformatics 17 (2), 169-182, 2019
32019
The pulmonary microbiome in sarcoidosis is similar to other parenchymal lung diseases
A Becker, G Vella, C Herr, A Keller, C Laczny, C Beisswenger, R Bals
European Respiratory Journal 52 (suppl 62), 2018
22018
Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
SM Arbas, S Narayanasamy, M Herold, LA Lebrun, MR Hoopmann, S Li, ...
Nature microbiology 6 (1), 123-135, 2021
2021
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Artikelen 1–20