| IMG 4 version of the integrated microbial genomes comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ... Nucleic acids research 42 (D1), D560-D567, 2014 | 544 | 2014 |
| Microbial species delineation using whole genome sequences NJ Varghese, S Mukherjee, N Ivanova, KT Konstantinidis, K Mavrommatis, ... Nucleic acids research 43 (14), 6761-6771, 2015 | 459 | 2015 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2019 | 389 | 2019 |
| Protein structure determination using metagenome sequence data S Ovchinnikov, H Park, N Varghese, PS Huang, GA Pavlopoulos, DE Kim, ... Science 355 (6322), 294-298, 2017 | 349 | 2017 |
| IMG/M: integrated genome and metagenome comparative data analysis system IMA Chen, VM Markowitz, K Chu, K Palaniappan, E Szeto, M Pillay, ... Nucleic acids research, gkw929, 2016 | 345 | 2016 |
| IMG/M 4 version of the integrated metagenome comparative analysis system VM Markowitz, IMA Chen, K Chu, E Szeto, K Palaniappan, M Pillay, ... Nucleic acids research 42 (D1), D568-D573, 2014 | 272 | 2014 |
| Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018 | 178 | 2018 |
| 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676-683, 2017 | 171 | 2017 |
| Genome data provides high support for generic boundaries in Burkholderia sensu lato CW Beukes, M Palmer, P Manyaka, WY Chan, JR Avontuur, E van Zyl, ... Frontiers in microbiology 8, 1154, 2017 | 65 | 2017 |
| Genome‐based evolutionary history of Pseudomonas spp C Hesse, F Schulz, CT Bull, BT Shaffer, Q Yan, N Shapiro, KA Hassan, ... Environmental microbiology 20 (6), 2142-2159, 2018 | 64 | 2018 |
| A genomic catalog of Earth’s microbiomes S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ... Nature biotechnology, 1-11, 2020 | 35 | 2020 |
| Permanent draft genome of Thiobacillus thioparus DSM 505 T, an obligately chemolithoautotrophic member of the Betaproteobacteria LP Hutt, M Huntemann, A Clum, M Pillay, K Palaniappan, N Varghese, ... Standards in genomic sciences 12 (1), 1-8, 2017 | 28 | 2017 |
| Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus IK Jordan, AB Conley, IV Antonov, RA Arthur, ED Cook, GP Cooper, ... Journal of bacteriology 193 (20), 5879-5880, 2011 | 28 | 2011 |
| GlyGly-CTERM and rhombosortase: a C-terminal protein processing signal in a many-to-one pairing with a rhomboid family intramembrane serine protease DH Haft, N Varghese PloS one 6 (12), e28886, 2011 | 23 | 2011 |
| Absence of genome reduction in diverse, facultative endohyphal bacteria DA Baltrus, K Dougherty, KR Arendt, M Huntemann, A Clum, M Pillay, ... Microbial genomics 3 (2), 2017 | 21 | 2017 |
| Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil MC Rice, JM Norton, F Valois, A Bollmann, PJ Bottomley, MG Klotz, ... Standards in genomic sciences 11 (1), 1-8, 2016 | 19 | 2016 |
| Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain … KM Scott, J Williams, CMB Porter, S Russel, TL Harmer, JH Paul, ... Environmental microbiology 20 (8), 2686-2708, 2018 | 13 | 2018 |
| Permanent draft genome of Thermithiobacillus tepidarius DSM 3134 T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia R Boden, LP Hutt, M Huntemann, A Clum, M Pillay, K Palaniappan, ... Standards in genomic sciences 11 (1), 1-8, 2016 | 12 | 2016 |
| Relating the disease mutation spectrum to the evolution of the cystic fibrosis transmembrane conductance regulator (CFTR) L Rishishwar, N Varghese, E Tyagi, SC Harvey, IK Jordan, NA McCarty PloS one 7 (8), e42336, 2012 | 11 | 2012 |
| Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom B Nowinski, CB Smith, CM Thomas, K Esson, R Marin, CM Preston, ... Scientific data 6 (1), 1-7, 2019 | 10 | 2019 |
