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Rizi Ai
Rizi Ai
Geverifieerd e-mailadres voor ucsd.edu
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Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
11702020
Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain
BB Lake*, R Ai*, GE Kaeser*, NS Salathia*, YC Yung, R Liu, A Wildberg, ...
Science 352 (6293), 1586-1590, 2016
9072016
Comprehensive epigenetic landscape of rheumatoid arthritis fibroblast-like synoviocytes
R Ai, T Laragione, D Hammaker, DL Boyle, A Wildberg, K Maeshima, ...
Nature communications 9 (1), 1921, 2018
1602018
Joint-specific DNA methylation and transcriptome signatures in rheumatoid arthritis identify distinct pathogenic processes
R Ai, D Hammaker, DL Boyle, R Morgan, AM Walsh, S Fan, GS Firestein, ...
Nature communications 7 (1), 11849, 2016
1352016
Normalization and noise reduction for single cell RNA-seq experiments
B Ding, L Zheng, Y Zhu, N Li, H Jia, R Ai, A Wildberg, W Wang
Bioinformatics 31 (13), 2225-2227, 2015
1172015
Perspectives on ENCODE
MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ...
Nature 583 (7818), 693-698, 2020
922020
DNA methylome signature in early rheumatoid arthritis synoviocytes compared with longstanding rheumatoid arthritis synoviocytes
R Ai, JW Whitaker, DL Boyle, PP Tak, DM Gerlag, W Wang, GS Firestein
Arthritis & rheumatology (Hoboken, NJ) 67 (7), 1978, 2015
87*2015
Abnormal PTPN11 enhancer methylation promotes rheumatoid arthritis fibroblast-like synoviocyte aggressiveness and joint inflammation
K Maeshima, SM Stanford, D Hammaker, C Sacchetti, L Zeng, R Ai, ...
JCI insight 1 (7), 2016
532016
Synoviocyte-targeted therapy synergizes with TNF inhibition in arthritis reversal
MND Svensson, M Zoccheddu, S Yang, G Nygaard, C Secchi, KM Doody, ...
Science Advances 6 (26), eaba4353, 2020
482020
Predicting CpG methylation levels by integrating Infinium HumanMethylation450 BeadChip array data
S Fan, K Huang, R Ai, M Wang, W Wang
Genomics 107 (4), 132-137, 2016
412016
Enhancing KDM5A and TLR activity improves the response to immune checkpoint blockade
L Wang, Y Gao, G Zhang, D Li, Z Wang, J Zhang, LC Hermida, L He, ...
Science Translational Medicine 12 (560), eaax2282, 2020
402020
Assessing characteristics of RNA amplification methods for single cell RNA sequencing
BMC Genomics, 966, 2016
40*2016
PTPN14 phosphatase and YAP promote TGFβ signalling in rheumatoid synoviocytes
A Bottini, DJ Wu, R Ai, M Le Roux, B Bartok, M Bombardieri, KM Doody, ...
Annals of the rheumatic diseases 78 (5), 600-609, 2019
372019
Integrative analysis with expanded DNA methylation data reveals common key regulators and pathways in cancers
S Fan, J Tang, N Li, Y Zhao, R Ai, K Zhang, M Wang, W Du, W Wang
NPJ genomic medicine 4 (1), 2, 2019
362019
Identification of DNA motifs that regulate DNA methylation
M Wang, K Zhang, V Ngo, C Liu, S Fan, JW Whitaker, Y Chen, R Ai, ...
Nucleic Acids Research 47 (13), 6753-6768, 2019
352019
T-Analyst: a program for efficient analysis of protein conformational changes by torsion angles
R Ai, M Qaiser Fatmi, CA Chang
Journal of computer-aided molecular design 24, 819-827, 2010
352010
Computationally expanding infinium HumanMethylation450 BeadChip array data to reveal distinct DNA methylation patterns of rheumatoid arthritis
S Fan, C Li, R Ai, M Wang, GS Firestein, W Wang
Bioinformatics 32 (12), 1773-1778, 2016
302016
Synergistic regulation and ligand-induced conformational changes of tryptophan synthase
MQ Fatmi, R Ai, CA Chang
Biochemistry 48 (41), 9921-9931, 2009
302009
Lasp1 regulates adherens junction dynamics and fibroblast transformation in destructive arthritis
D Beckmann, A Römer-Hillmann, A Krause, U Hansen, C Wehmeyer, ...
Nature Communications 12 (1), 3624, 2021
222021
Joint location–specific JAK‐STAT signaling in rheumatoid arthritis fibroblast‐like synoviocytes
D Hammaker, G Nygaard, A Kuhs, R Ai, DL Boyle, W Wang, GS Firestein
ACR open rheumatology 1 (10), 640-648, 2019
222019
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Artikelen 1–20