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Hetu K
Hetu K
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Assessing the utility of coevolution-based residue–residue contact predictions in a sequence-and structure-rich era
H Kamisetty, S Ovchinnikov, D Baker
Proceedings of the National Academy of Sciences 110 (39), 15674-15679, 2013
7372013
Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
S Ovchinnikov, H Kamisetty, D Baker
elife 3, e02030, 2014
6782014
Protein structure determination using metagenome sequence data
S Ovchinnikov, H Park, N Varghese, PS Huang, GA Pavlopoulos, DE Kim, ...
Science 355 (6322), 294-298, 2017
5302017
Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing
TA Whitehead, A Chevalier, Y Song, C Dreyfus, SJ Fleishman, ...
Nature biotechnology 30 (6), 543-548, 2012
4462012
Learning generative models for protein fold families
S Balakrishnan, H Kamisetty, JG Carbonell, SI Lee, CJ Langmead
Proteins: Structure, Function, and Bioinformatics 79 (4), 1061-1078, 2011
3782011
Large-scale determination of previously unsolved protein structures using evolutionary information
S Ovchinnikov, L Kinch, H Park, Y Liao, J Pei, DE Kim, H Kamisetty, ...
elife 4, e09248, 2015
2722015
Origins of coevolution between residues distant in protein 3D structures
I Anishchenko, S Ovchinnikov, H Kamisetty, D Baker
Proceedings of the National Academy of Sciences 114 (34), 9122-9127, 2017
1822017
Computation and functional studies provide a model for the structure of the zinc transporter hZIP4
S Antala, S Ovchinnikov, H Kamisetty, D Baker, RE Dempski
Journal of Biological Chemistry 290 (29), 17796-17805, 2015
822015
Accounting for conformational entropy in predicting binding free energies of protein‐protein interactions
H Kamisetty, A Ramanathan, C Bailey‐Kellogg, CJ Langmead
Proteins: Structure, Function, and Bioinformatics 79 (2), 444-462, 2011
652011
Free energy estimates of all-atom protein structures using generalized belief propagation
H Kamisetty, EP Xing, CJ Langmead
Journal of Computational Biology 15 (7), 755-766, 2008
472008
Free energy estimates of all-atom protein structures using generalized belief propagation
H Kamisetty, EP Xing, CJ Langmead
Research in Computational Molecular Biology: 11th Annual International …, 2007
272007
Match-tensor: a deep relevance model for search
A Jaech, H Kamisetty, E Ringger, C Clarke
arXiv preprint arXiv:1701.07795, 2017
252017
An efficient randomized algorithm for contact-based NMR backbone resonance assignment
H Kamisetty, C Bailey-Kellogg, G Pandurangan
Bioinformatics 22 (2), 172-180, 2006
222006
Learning sequence determinants of protein: protein interaction specificity with sparse graphical models
H Kamisetty, B Ghosh, CJ Langmead, C Bailey-Kellogg
Journal of Computational Biology 22 (6), 474-486, 2015
112015
Learning generative models of molecular dynamics
NS Razavian, H Kamisetty, CJ Langmead
BMC genomics 13, 1-13, 2012
112012
The von Mises graphical model: regularized structure and parameter learning
N Razavian, H Kamisetty, CJ Langmead
Dept. Comput. Sci., Carnegie Mellon Univ., Pittsburgh, PA, USA, Tech. Rep …, 2011
102011
Approximating Correlated Equilibria using Relaxations on the Marginal Polytope.
H Kamisetty, EP Xing, CJ Langmead
ICML, 1153-1160, 2011
92011
The von mises graphical model: structure learning
NS Razavian, H Kamisetty, CJ Langmead
Carnegie Mellon University School of Computer Science Technical Report, 2011
92011
Modeling and inference of sequence-structure specificity
H Kamisetty, B Ghosh, C Bailey-Kellog, CJ Langmead
Carnegie Mellon University, 2009
92009
A graphical model approach for predicting free energies of association for protein-protein interactions under backbone and side-chain flexibility
H Kamisetty, C Bailey-Kellogg, CJ Langmead
Technical Report CMU-CS-08-162, Carnegie Mellon University, 2008
92008
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