Laurent Noé

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Gregory KucherovDirecteur de recherche CNRS, LIGM, Univ Gaspard Monge, FranceVerified email at univ-mlv.fr
Helene TouzetCNRS, Lille (France)Verified email at univ-lille.fr
Evguenia KopylovaHost-microbiome data analysis | Managing Director, Clarity GenomicsVerified email at clarity-genomics.com
Mikhail RoytbergHead of Applied Math Lab, Institute of Mathematical Problems in Biology RAS, Pushchino, Russia Verified email at lpm.org.ru
Ania GambinInstitute of Informatics University of WarsawVerified email at mimuw.edu.pl
Slawomir LasotaUniversity of Warsaw, prof. of computer scienceVerified email at mimuw.edu.pl
Martin FrithNational Institute of Advanced Industrial Science and Technology (AIST), University of TokyoVerified email at edu.k.u-tokyo.ac.jp
Mathieu GiraudSenior Researcher, CNRS, CRIStAL, Université Lille, InriaVerified email at univ-lille.fr
Maude PupinMaître de conférences en informatique, Université de LilleVerified email at univ-lille.fr
Yoann DUFRESNEPhD, Institut Pasteur, ParisVerified email at pasteur.fr
Philippe JacquesUniversite de liegeVerified email at uliege.be
Ewa SzczurekAssociate Professor, University of WarsawVerified email at mimuw.edu.pl
Dominique LavenierIRISAVerified email at irisa.fr
Miklós CsűrösUniversity of MontrealVerified email at iro.umontreal.ca
Pierre PeterlongoInriaVerified email at inria.fr
Yann PontySenior researcher at CNRS & Ecole PolytechniqueVerified email at lix.polytechnique.fr
Maciek SykulskiMedical University of WarsawVerified email at mimuw.edu.pl
Michał StartekUniversity of Warsaw, Faculty of Mathematics, Informatics and Mechanics; Institute of ImmunologyVerified email at mimuw.edu.pl
Matteo CominUniversity of PadovaVerified email at dei.unipd.it
Cinzia PizziAssociate Professor of Computer Engineering, Dept. of Information Engineering, University of PadovaVerified email at dei.unipd.it

Laurent Noé

associate professor (computer science) enseignant-chercheur (informatique), Lille (France)

Verified email at univ-lille.fr - Homepage

Automata Computational Biology Sequence Alignment Similarity Search String Algorithms


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data E Kopylova, L Noé, H Touzet Bioinformatics 28 (24), 3211-3217, 2012	1971	2012
YASS: enhancing the sensitivity of DNA similarity search L Noé, G Kucherov Nucleic acids research 33 (suppl_2), W540-W543, 2005	373	2005
A unifying framework for seed sensitivity and its application to subset seeds G Kucherov, L Noé, M Roytberg Journal of Bioinformatics and Computational Biology (JBCB) 4 (2), 553-569, 2006	114	2006
A unifying framework for seed sensitivity and its application to subset seeds (Extended Abstract) G Kucherov, L Noé, M Roytberg Workshop on Algorithms in Bioinformatics (WABI), 251-263, 2005	114*	2005
Improved hit criteria for DNA local alignment L Noé, G Kucherov BMC bioinformatics 5, 1-9, 2004	96	2004
Multiseed lossless filtration G Kucherov, L Noé, M Roytberg Transactions on Computational Biology and Bioinformatics (TCBB) 2 (1), 51-61, 2005	82	2005
Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing A Flissi, Y Dufresne, J Michalik, L Tonon, S Janot, L Noé, P Jacques, ... Nucleic Acids Research 44 (D1), D1113-D1118, 2016	60	2016
Estimating seed sensitivity on homogeneous alignments G Kucherov, L Noé, Y Ponty Bioinformatics and Bioengineering (BIBE), 387-394, 2004	44	2004
Reconsidering the significance of genomic word frequencies M Csurös, L Noé, G Kucherov Trends in Genetics 23 (11), 543-546, 2007	38	2007
A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels and k-Mer Distances L Noé, DEK Martin Journal of Computational Biology (JCB) 21 (12), 947-963, 2014	32	2014
A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels and k-Mer Distances L Noé, DEK Martin Journal of Computational Biology (JCB) 21 (12), 947-963, 2014	32	2014
Improved search heuristics find 20 000 new alignments between human and mouse genomes MC Frith, L Noé Nucleic acids research 42 (7), e59-e59, 2014	31	2014
On subset seeds for protein alignment M Roytberg, A Gambin, L Noé, S Lasota, E Furletova, E Szczurek, ... Transactions on Computational Biology and Bioinformatics (TCBB) 6 (3), 483-494, 2009	29	2009
Multi-seed lossless filtration (Extended Abstract) G Kucherov, L Noé, M Roytberg Combinatorial Pattern Matching (CPM), 297-310, 2004	28*	2004
Subset seed automaton G Kucherov, L Noé, M Roytberg Conference on Implementation and Application of Automata (CIAA), 180-191, 2007	24	2007
Protein similarity search with subset seeds on a dedicated reconfigurable hardware P Peterlongo, L Noé, D Lavenier, G Georges, J Jacques, G Kucherov, ... Parallel Processing and Applied Mathematics (PPAM), 1240-1248, 2008	22	2008
Smiles2Monomers: a link between chemical and biological structures for polymers Y Dufresne, L Noé, V Leclère, M Pupin Journal of cheminformatics 7 (1), 1-11, 2015	21	2015
Best hits of 11110110111: model-free selection and parameter-free sensitivity calculation of spaced seeds L Noé Algorithms for Molecular Biology (AMB) 12 (1), 2017	20	2017
Back-translation for discovering distant protein homologies in the presence of frameshift mutations M Gîrdea, L Noé, G Kucherov Algorithms for Molecular Biology (AMB) 5 (6), 2010	20	2010
YASS: Similarity search in DNA sequences L Noé, G Kucherov Technical Report, 2003	18	2003

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