John Wagner
John Wagner
IBM Research - Australia
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Cited by
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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
M Hucka, A Finney, HM Sauro, H Bolouri, JC Doyle, H Kitano, AP Arkin, ...
Bioinformatics 19 (4), 524-531, 2003
Computational Cell Biology {Interdisciplinary Applied Mathematics; V. 20}
CP Fall
Springer-Verlag New York Incorporated, 2002
Effects of rapid buffers on Ca2+ diffusion and Ca2+ oscillations
J Wagner, J Keizer
Biophysical journal 67 (1), 447-456, 1994
A plausible model for the digital response of p53 to DNA damage
L Ma, J Wagner, JJ Rice, W Hu, AJ Levine, GA Stolovitzky
Proceedings of the National Academy of Sciences 102 (40), 14266-14271, 2005
Validity of the rapid buffering approximation near a point source of calcium ions
GD Smith, J Wagner, J Keizer
Biophysical Journal 70 (6), 2527-2539, 1996
A single nucleotide polymorphism in the MDM2 gene disrupts the oscillation of p53 and MDM2 levels in cells
W Hu, Z Feng, L Ma, J Wagner, JJ Rice, G Stolovitzky, AJ Levine
Cancer research 67 (6), 2757-2765, 2007
p53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback
J Wagner, L Ma, JJ Rice, W Hu, AJ Levine, GA Stolovitzky
IEE Proceedings-Systems Biology 2 (3), 109-118, 2005
High venous urea concentrations in the opposite arm. A consequence of hemodialysis-induced compartment disequilibrium.
TA Depner, S Rizwan, AY Cheer, JM Wagner, LA Eder
ASAIO transactions 37 (3), M141-3, 1991
Simulation of the fertilization Ca2+ wave in Xenopus laevis eggs
J Wagner, YX Li, J Pearson, J Keizer
Biophysical journal 75 (4), 2088-2097, 1998
Unique Aspects of the Structure and Dynamics of Elementary Iβ Cellulose Microfibrils Revealed by Computational Simulations  
DP Oehme, MT Downton, MS Doblin, J Wagner, MJ Gidley, A Bacic
Plant physiology 168 (1), 3-17, 2015
Ordered cyclic motifs contribute to dynamic stability in biological and engineered networks
A Ma'ayan, GA Cecchi, J Wagner, AR Rao, R Iyengar, G Stolovitzky
Proceedings of the National Academy of Sciences 105 (49), 19235-19240, 2008
Analysis of nonlinear dynamics on arbitrary geometries with the Virtual Cell
JC Schaff, BM Slepchenko, YS Choi, J Wagner, D Resasco, LM Loew
Chaos: An Interdisciplinary Journal of Nonlinear Science 11 (1), 115-131, 2001
A wave of IP3 production accompanies the fertilization Ca2+ wave in the egg of the frog, Xenopus laevis: theoretical and experimental support
J Wagner, CP Fall, F Hong, CE Sims, NL Allbritton, RA Fontanilla, ...
Cell calcium 35 (5), 433-447, 2004
An ultrascalable solution to large-scale neural tissue simulation
J Kozloski, J Wagner
Frontiers in neuroinformatics 5, 15, 2011
Mobile device offloading task to a peer device and receiving a completed task when energy level is below a threshold level
TM Lynar, KCB Steer, C Vecchiola, JM Wagner
US Patent 9,110,661, 2015
Gaining insight into cell wall cellulose macrofibril organisation by simulating microfibril adsorption
DP Oehme, MS Doblin, J Wagner, A Bacic, MT Downton, MJ Gidley
Cellulose 22 (6), 3501-3520, 2015
Dimerization of bacterial diaminopimelate epimerase is essential for catalysis
L Hor, RCJ Dobson, MT Downton, J Wagner, CA Hutton, MA Perugini
Journal of Biological Chemistry 288 (13), 9238-9248, 2013
Enzymology of bacterial lysine biosynthesis
C Dogovski, SC Atkinson, SR Dommaraju, M Downton, L Hor, S Moore, ...
Biochemistry, 2012
Evolutionary dynamics of the cellulose synthase gene superfamily in grasses
JG Schwerdt, K MacKenzie, F Wright, D Oehme, JM Wagner, AJ Harvey, ...
Plant physiology 168 (3), 968-983, 2015
High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies
B Goudey, M Abedini, JL Hopper, M Inouye, E Makalic, DF Schmidt, ...
Health information science and systems 3 (1), 1-11, 2015
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