| Anvi’o: an advanced analysis and visualization platform for ‘omics data AM Eren, ÖC Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ... PeerJ 3, e1319, 2015 | 687 | 2015 |
| Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 515 | 2017 |
| Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data AM Eren, L Maignien, WJ Sul, LG Murphy, SL Grim, HG Morrison, ... Methods in Ecology and Evolution 4 (12), 1111-1119, 2013 | 479 | 2013 |
| Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences AM Eren, HG Morrison, PJ Lescault, J Reveillaud, JH Vineis, ML Sogin The ISME journal 9 (4), 968-979, 2015 | 389 | 2015 |
| The gut microbiota of rural papua new guineans: composition, diversity patterns, and ecological processes I Martínez, JC Stegen, MX Maldonado-Gómez, AM Eren, PM Siba, ... Cell reports 11 (4), 527-538, 2015 | 367 | 2015 |
| Oligotyping analysis of the human oral microbiome AM Eren, GG Borisy, SM Huse, JLM Welch Proceedings of the National Academy of Sciences 111 (28), E2875-E2884, 2014 | 222 | 2014 |
| A filtering method to generate high quality short reads using Illumina paired-end technology AM Eren, JH Vineis, HG Morrison, ML Sogin PloS one 8 (6), e66643, 2013 | 216 | 2013 |
| Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ... Nature Microbiology, 1, 2018 | 191 | 2018 |
| Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation AM Eren, M Zozaya, CM Taylor, SE Dowd, DH Martin, MJ Ferris PloS one 6 (10), e26732, 2011 | 188 | 2011 |
| VAMPS: a website for visualization and analysis of microbial population structures SM Huse, DBM Welch, A Voorhis, A Shipunova, HG Morrison, AM Eren, ... BMC bioinformatics 15 (1), 1-7, 2014 | 182 | 2014 |
| Host-specificity among abundant and rare taxa in the sponge microbiome J Reveillaud, L Maignien, AM Eren, JA Huber, A Apprill, ML Sogin, ... The ISME journal, 2014 | 177 | 2014 |
| Extensive modulation of the fecal metagenome in children with Crohn’s disease during exclusive enteral nutrition C Quince, UZ Ijaz, N Loman, AM Eren, D Saulnier, J Russell, SJ Haig, ... The American journal of gastroenterology 110 (12), 1718, 2015 | 168 | 2015 |
| Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities L Maignien, EA DeForce, ME Chafee, AM Eren, SL Simmons MBio 5 (1), 2014 | 164 | 2014 |
| Sewage reflects the microbiomes of human populations RJ Newton, SL McLellan, DK Dila, JH Vineis, HG Morrison, AM Eren, ... MBio 6 (2), 2015 | 142 | 2015 |
| Linking pangenomes and metagenomes: the Prochlorococcus metapangenome TO Delmont, AM Eren PeerJ 6, e4320, 2018 | 130 | 2018 |
| Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes M Bálint, M Bahram, AM Eren, K Faust, JA Fuhrman, B Lindahl, RB O'hara, ... FEMS microbiology reviews 40 (5), 686-700, 2016 | 130 | 2016 |
| A single genus in the gut microbiome reflects host preference and specificity AM Eren, ML Sogin, HG Morrison, JH Vineis, JC Fisher, RJ Newton, ... The ISME journal 9 (1), 90-100, 2015 | 124 | 2015 |
| Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host M Meisel, R Hinterleitner, A Pacis, L Chen, ZM Earley, T Mayassi, ... Nature 557 (7706), 580-584, 2018 | 118 | 2018 |
| Discovering new indicators of fecal pollution SL McLellan, AM Eren Trends in microbiology 22 (12), 697-706, 2014 | 108 | 2014 |
| Bacterial communities in penile skin, male urethra, and vaginas of heterosexual couples with and without bacterial vaginosis M Zozaya, MJ Ferris, JD Siren, R Lillis, L Myers, MJ Nsuami, AM Eren, ... Microbiome 4 (1), 1-10, 2016 | 99 | 2016 |
Mitchell SoginJoesphine Bay Paul Center at the MBLVerified email at mbl.edu
