A. Murat Eren
A. Murat Eren
Assistant Professor, University of Chicago
Verified email at uchicago.edu - Homepage
Title
Cited by
Cited by
Year
Anvi’o: an advanced analysis and visualization platform for ‘omics data
AM Eren, ÖC Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PeerJ 3, e1319, 2015
6872015
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725-731, 2017
5152017
Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data
AM Eren, L Maignien, WJ Sul, LG Murphy, SL Grim, HG Morrison, ...
Methods in Ecology and Evolution 4 (12), 1111-1119, 2013
4792013
Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
AM Eren, HG Morrison, PJ Lescault, J Reveillaud, JH Vineis, ML Sogin
The ISME journal 9 (4), 968-979, 2015
3892015
The gut microbiota of rural papua new guineans: composition, diversity patterns, and ecological processes
I Martínez, JC Stegen, MX Maldonado-Gómez, AM Eren, PM Siba, ...
Cell reports 11 (4), 527-538, 2015
3672015
Oligotyping analysis of the human oral microbiome
AM Eren, GG Borisy, SM Huse, JLM Welch
Proceedings of the National Academy of Sciences 111 (28), E2875-E2884, 2014
2222014
A filtering method to generate high quality short reads using Illumina paired-end technology
AM Eren, JH Vineis, HG Morrison, ML Sogin
PloS one 8 (6), e66643, 2013
2162013
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ...
Nature Microbiology, 1, 2018
1912018
Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation
AM Eren, M Zozaya, CM Taylor, SE Dowd, DH Martin, MJ Ferris
PloS one 6 (10), e26732, 2011
1882011
VAMPS: a website for visualization and analysis of microbial population structures
SM Huse, DBM Welch, A Voorhis, A Shipunova, HG Morrison, AM Eren, ...
BMC bioinformatics 15 (1), 1-7, 2014
1822014
Host-specificity among abundant and rare taxa in the sponge microbiome
J Reveillaud, L Maignien, AM Eren, JA Huber, A Apprill, ML Sogin, ...
The ISME journal, 2014
1772014
Extensive modulation of the fecal metagenome in children with Crohn’s disease during exclusive enteral nutrition
C Quince, UZ Ijaz, N Loman, AM Eren, D Saulnier, J Russell, SJ Haig, ...
The American journal of gastroenterology 110 (12), 1718, 2015
1682015
Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities
L Maignien, EA DeForce, ME Chafee, AM Eren, SL Simmons
MBio 5 (1), 2014
1642014
Sewage reflects the microbiomes of human populations
RJ Newton, SL McLellan, DK Dila, JH Vineis, HG Morrison, AM Eren, ...
MBio 6 (2), 2015
1422015
Linking pangenomes and metagenomes: the Prochlorococcus metapangenome
TO Delmont, AM Eren
PeerJ 6, e4320, 2018
1302018
Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes
M Bálint, M Bahram, AM Eren, K Faust, JA Fuhrman, B Lindahl, RB O'hara, ...
FEMS microbiology reviews 40 (5), 686-700, 2016
1302016
A single genus in the gut microbiome reflects host preference and specificity
AM Eren, ML Sogin, HG Morrison, JH Vineis, JC Fisher, RJ Newton, ...
The ISME journal 9 (1), 90-100, 2015
1242015
Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host
M Meisel, R Hinterleitner, A Pacis, L Chen, ZM Earley, T Mayassi, ...
Nature 557 (7706), 580-584, 2018
1182018
Discovering new indicators of fecal pollution
SL McLellan, AM Eren
Trends in microbiology 22 (12), 697-706, 2014
1082014
Bacterial communities in penile skin, male urethra, and vaginas of heterosexual couples with and without bacterial vaginosis
M Zozaya, MJ Ferris, JD Siren, R Lillis, L Myers, MJ Nsuami, AM Eren, ...
Microbiome 4 (1), 1-10, 2016
992016
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