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Philippe Lemey
Philippe Lemey
Full Professor, KU Leuven
Adresse e-mail validée de kuleuven.be - Page d'accueil
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Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
MA Suchard, P Lemey, G Baele, DL Ayres, AJ Drummond, A Rambaut
Virus evolution 4 (1), vey016, 2018
31102018
Bayesian phylogeography finds its roots
P Lemey, A Rambaut, AJ Drummond, MA Suchard
PLoS computational biology 5 (9), e1000520, 2009
18452009
RDP3: a flexible and fast computer program for analyzing recombination
DP Martin, P Lemey, M Lott, V Moulton, D Posada, P Lefeuvre
Bioinformatics 26 (19), 2462-2463, 2010
18402010
Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil
NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ...
Science 372 (6544), 815-821, 2021
16242021
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
G Baele, P Lemey, T Bedford, A Rambaut, MA Suchard, AV Alekseyenko
Molecular biology and evolution 29 (9), 2157-2167, 2012
11552012
Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic
MF Boni, P Lemey, X Jiang, TTY Lam, BW Perry, TA Castoe, A Rambaut, ...
Nature microbiology 5 (11), 1408-1417, 2020
10782020
The early spread and epidemic ignition of HIV-1 in human populations
NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, MJ Ward, ...
science 346 (6205), 56-61, 2014
10062014
Mapping the origins and expansion of the Indo-European language family
R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ...
Science 337 (6097), 957-960, 2012
8292012
Phylogeography takes a relaxed random walk in continuous space and time
P Lemey, A Rambaut, JJ Welch, MA Suchard
Molecular biology and evolution 27 (8), 1877-1885, 2010
7532010
Assessing substitution saturation with DAMBE
X Xia, P Lemey
The phylogenetic handbook: a practical approach to DNA and protein phylogeny …, 2009
7152009
Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event
L Vijgen, E Keyaerts, E Moës, I Thoelen, E Wollants, P Lemey, ...
Journal of virology 79 (3), 1595-1604, 2005
6902005
Evolution and epidemic spread of SARS-CoV-2 in Brazil
DS Candido, IM Claro, JG De Jesus, WM Souza, FRR Moreira, ...
Science 369 (6508), 1255-1260, 2020
6782020
The phylogenetic handbook: a practical approach to phylogenetic analysis and hypothesis testing
P Lemey, M Salemi, AM Vandamme
Cambridge University Press, 2009
6402009
Accurate model selection of relaxed molecular clocks in Bayesian phylogenetics
G Baele, WLS Li, AJ Drummond, MA Suchard, P Lemey
Molecular biology and evolution 30 (2), 239-243, 2012
6312012
Tracing the origin and history of the HIV-2 epidemic
P Lemey, OG Pybus, B Wang, NK Saksena, M Salemi, AM Vandamme
Proceedings of the National Academy of Sciences 100 (11), 6588-6592, 2003
6262003
Global circulation patterns of seasonal influenza viruses vary with antigenic drift
T Bedford, S Riley, IG Barr, S Broor, M Chadha, NJ Cox, RS Daniels, ...
Nature 523 (7559), 217-220, 2015
5622015
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
F Bielejec, A Rambaut, MA Suchard, P Lemey
Bioinformatics 27 (20), 2910-2912, 2011
5562011
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci
MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard
Molecular biology and evolution 30 (3), 713-724, 2013
5372013
SpreaD3: interactive visualization of spatiotemporal history and trait evolutionary processes
F Bielejec, G Baele, B Vrancken, MA Suchard, A Rambaut, P Lemey
Molecular biology and evolution 33 (8), 2167-2169, 2016
4642016
Virus genomes reveal factors that spread and sustained the Ebola epidemic
G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ...
Nature 544 (7650), 309-315, 2017
4522017
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