Huixiao Hong
Huixiao Hong
National Center for Toxicological Research
Verified email at fda.hhs.gov
Title
Cited by
Cited by
Year
The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements
L Shi, LH Reid, WD Jones, R Shippy, JA Warrington, SC Baker, PJ Collins, ...
Nature biotechnology 24 (9), 1151, 2006
22642006
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
MaQC Consortium
Nature biotechnology 28 (8), 827, 2010
7132010
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature Biotechnology 32 (9), 903–914, 2014
602*2014
Study of 202 natural, synthetic, and environmental chemicals for binding to the androgen receptor
H Fang, W Tong, WS Branham, CL Moland, SL Dial, H Hong, Q Xie, ...
Chemical research in toxicology 16 (10), 1338-1358, 2003
3832003
Coumarin-Based Inhibitors of HIV Integrase
H Zhao, N Neamati, H Hong, A Mazumder, S Wang, S Sunder, GWA Milne, ...
Journal of medicinal chemistry 40 (2), 242-249, 1997
3671997
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ...
Nature biotechnology 32 (9), 926-932, 2014
3642014
Depsides and depsidones as inhibitors of HIV-1 integrase: discovery of novel inhibitors through 3D database searching
N Neamati, H Hong, A Mazumder, S Wang, S Sunder, MC Nicklaus, ...
Journal of medicinal chemistry 40 (6), 942-951, 1997
2961997
A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data
J Luo, M Schumacher, A Scherer, D Sanoudou, D Megherbi, T Davison, ...
The pharmacogenomics journal 10 (4), 278-291, 2010
2662010
Comparison of RNA-seq and microarray-based models for clinical endpoint prediction
W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang, D Thierry-Mieg, ...
Genome biology 16 (1), 1-12, 2015
2522015
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Y Yu, JC Fuscoe, C Zhao, C Guo, M Jia, T Qing, DI Bannon, L Lancashire, ...
Nature communications 5 (1), 1-11, 2014
2452014
ArrayTrack--supporting toxicogenomic research at the US Food and Drug Administration National Center for Toxicological Research.
W Tong, X Cao, S Harris, H Sun, H Fang, J Fuscoe, A Harris, H Hong, ...
Environmental health perspectives 111 (15), 1819-1826, 2003
2382003
Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential
L Shi, W Tong, H Fang, U Scherf, J Han, RK Puri, FW Frueh, FM Goodsaid, ...
BMC bioinformatics 6 (2), 1-14, 2005
2352005
Decision forest: combining the predictions of multiple independent decision tree models
W Tong, H Hong, H Fang, Q Xie, R Perkins
Journal of Chemical Information and Computer Sciences 43 (2), 525-531, 2003
2302003
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies
L Shi, WD Jones, RV Jensen, SC Harris, RG Perkins, FM Goodsaid, ...
BMC bioinformatics 9 (9), 1-19, 2008
2252008
HIV-1 integrase pharmacophore: discovery of inhibitors through three-dimensional database searching
MC Nicklaus, N Neamati, H Hong, A Mazumder, S Sunder, J Chen, ...
Journal of medicinal chemistry 40 (6), 920-929, 1997
2081997
CERAPP: collaborative estrogen receptor activity prediction project
K Mansouri, A Abdelaziz, A Rybacka, A Roncaglioni, A Tropsha, A Varnek, ...
Environmental health perspectives 124 (7), 1023-1033, 2016
1972016
Mold2, Molecular Descriptors from 2D Structures for Chemoinformatics and Toxicoinformatics
H Hong, Q Xie, W Ge, F Qian, H Fang, L Shi, Z Su, R Perkins, W Tong
Journal of chemical information and modeling 48 (7), 1337-1344, 2008
1942008
Next-generation sequencing and its applications in molecular diagnostics
Z Su, B Ning, H Fang, H Hong, R Perkins, W Tong, L Shi
Expert review of molecular diagnostics 11 (3), 333-343, 2011
1882011
Prediction of estrogen receptor binding for 58,000 chemicals using an integrated system of a tree-based model with structural alerts.
H Hong, W Tong, H Fang, L Shi, Q Xie, J Wu, R Perkins, JD Walker, ...
Environmental health perspectives 110 (1), 29-36, 2002
1632002
Assessment of prediction confidence and domain extrapolation of two structure–activity relationship models for predicting estrogen receptor binding activity
W Tong, Q Xie, H Hong, L Shi, H Fang, R Perkins
Environmental health perspectives 112 (12), 1249-1254, 2004
1532004
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Articles 1–20