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Timothy A. Johnson
Timothy A. Johnson
Purdue University, Animal Sciences
Verified email at purdue.edu
Title
Cited by
Cited by
Year
Diverse and abundant antibiotic resistance genes in Chinese swine farms
YG Zhu, TA Johnson, JQ Su, M Qiao, GX Guo, RD Stedtfeld, ...
Proceedings of the National Academy of Sciences 110 (9), 3435-3440, 2013
19102013
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
B Jia, AR Raphenya, B Alcock, N Waglechner, P Guo, KK Tsang, BA Lago, ...
Nucleic acids research, gkw1004, 2016
16512016
In-feed antibiotic effects on the swine intestinal microbiome
T Looft, TA Johnson, HK Allen, DO Bayles, DP Alt, RD Stedtfeld, WJ Sul, ...
Proceedings of the National Academy of Sciences 109 (5), 1691-1696, 2012
9192012
High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant
A Karkman, TA Johnson, C Lyra, RD Stedtfeld, M Tamminen, JM Tiedje, ...
FEMS microbiology ecology 92 (3), fiw014, 2016
1842016
Clusters of antibiotic resistance genes enriched together stay together in swine agriculture
TA Johnson, RD Stedtfeld, Q Wang, JR Cole, SA Hashsham, T Looft, ...
MBio 7 (2), e02214-15, 2016
1502016
Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments
WI Muziasari, K Pärnänen, TA Johnson, C Lyra, A Karkman, RD Stedtfeld, ...
FEMS microbiology ecology 92 (4), fiw052, 2016
1212016
Comparison of the specificities and efficacies of primers for aromatic dioxygenase gene analysis of environmental samples
S Iwai, TA Johnson, B Chai, SA Hashsham, JM Tiedje
Applied and environmental microbiology 77 (11), 3551-3557, 2011
862011
Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter
CR Penton, TA Johnson, JF Quensen III, S Iwai, JR Cole, JM Tiedje
Frontiers in microbiology 4, 279, 2013
802013
Antimicrobial resistance dashboard application for mapping environmental occurrence and resistant pathogens
RD Stedtfeld, MR Williams, U Fakher, TA Johnson, TM Stedtfeld, F Wang, ...
FEMS microbiology ecology 92 (3), 2016
402016
The in-feed antibiotic carbadox induces phage gene transcription in the swine gut microbiome
TA Johnson, T Looft, AJ Severin, DO Bayles, DJ Nasko, KE Wommack, ...
MBio 8 (4), e00709-17, 2017
312017
Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay
B Chai, TV Tsoi, S Iwai, C Liu, JA Fish, C Gu, TA Johnson, G Zylstra, ...
PLoS One 11 (6), e0157008, 2016
312016
In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
TA Johnson, MJ Sylte, T Looft
Scientific reports 9 (1), 1-11, 2019
222019
Composition and diversity of the preputial microbiota in healthy bulls
CL Wickware, TA Johnson, JH Koziol
Theriogenology 145, 231-237, 2020
162020
Swine growth promotion with antibiotics or alternatives can increase antibiotic resistance gene mobility potential
J Muurinen, J Richert, CL Wickware, B Richert, TA Johnson
Scientific reports 11 (1), 1-13, 2021
142021
Evaluation of nucleic acid isothermal amplification methods for human clinical microbial infection detection
BE Etchebarne, Z Li, RD Stedtfeld, MC Nicholas, MR Williams, ...
Frontiers in Microbiology 8, 2211, 2017
142017
Intra‐Aggregate Pore Structures and Escherichia coli Distribution by Water Flow within and Movement Out of Soil Macroaggregates
W Wang, AN Kravchenko, T Johnson, S Srinivasan, KA Ananyeva, ...
Vadose Zone Journal 12 (4), 1-14, 2013
132013
On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples
A Pascual-Garrigos, MK Maruthamuthu, A Ault, JL Davidson, G Rudakov, ...
Veterinary research 52 (1), 1-12, 2021
82021
Evaluation of different Campylobacter jejuni isolates to colonize the intestinal tract of commercial turkey poults and selective media for enumeration
MJ Sylte, MH Inbody, TA Johnson, T Looft, JE Line
Poultry science 97 (5), 1689-1698, 2018
82018
Resistance-guided discovery of elfamycin antibiotic producers with antigonococcal activity
V Yarlagadda, R Medina, TA Johnson, KP Koteva, G Cox, MN Thaker, ...
ACS Infectious Diseases 6 (12), 3163-3173, 2020
72020
Dietary fiber hierarchical specificity: the missing link for predictable and strong shifts in gut bacterial communities
TM Cantu-Jungles, N Bulut, E Chambry, A Ruthes, M Iacomini, ...
Mbio 12 (3), e01028-21, 2021
52021
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