Distance matters: the impact of gene proximity in bacterial gene regulation O Pulkkinen, R Metzler Physical review letters 110 (19), 198101, 2013 | 122 | 2013 |
Fluctuations of hi-hat timing and dynamics in a virtuoso drum track of a popular music recording E Räsänen, O Pulkkinen, T Virtanen, M Zollner, H Hennig PLoS One 10 (6), e0127902, 2015 | 44 | 2015 |
Contrasting the impact of cytotoxic and cytostatic drug therapies on tumour progression JV Anttila, M Shubin, J Cairns, F Borse, Q Guo, T Mononen, ... PLoS computational biology 15 (11), e1007493, 2019 | 41 | 2019 |
Burst statistics in an early biofilm quorum sensing model: the role of spatial colony-growth heterogeneity O Kindler, O Pulkkinen, AG Cherstvy, R Metzler Scientific Reports 9 (1), 12077, 2019 | 28 | 2019 |
Variance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation O Pulkkinen, R Metzler Scientific Reports 5, 17820, 2016 | 27 | 2016 |
Diffusion through thin membranes: Modeling across scales V Aho, K Mattila, T Kühn, P Kekäläinen, O Pulkkinen, RB Minussi, ... Physical Review E 93 (4), 043309, 2016 | 22 | 2016 |
Cluster size distributions in particle systems with asymmetric dynamics O Pulkkinen, J Merikoski Physical Review E 64 (5), 056114, 2001 | 14 | 2001 |
Phase transitions on Markovian bipartite graphs—an application of the zero-range process O Pulkkinen, J Merikoski Journal of statistical physics 119, 881-907, 2005 | 10 | 2005 |
Multiobjective optimization identifies cancer-selective combination therapies OI Pulkkinen, P Gautam, V Mustonen, T Aittokallio PLoS Computational Biology 16 (12), e1008538, 2020 | 9 | 2020 |
Polymer dynamics in time-dependent periodic potentials J Kauttonen, J Merikoski, O Pulkkinen Physical Review E 77 (6), 061131, 2008 | 8 | 2008 |
Roughness of two nonintersecting one-dimensional interfaces J Juntunen, O Pulkkinen, J Merikoski Physical Review E 76 (4), 041607, 2007 | 8 | 2007 |
Boundary driven zero-range processes in random media O Pulkkinen Journal of Statistical Physics 128, 1289-1305, 2007 | 8 | 2007 |
Target-specific compound selectivity for multi-target drug discovery and repurposing T Wang, OI Pulkkinen, T Aittokallio Frontiers in pharmacology 13, 1003480, 2022 | 7 | 2022 |
Finite-size effects in dynamics of zero-range processes J Juntunen, O Pulkkinen, J Merikoski Physical Review E 82 (3), 031119, 2010 | 3 | 2010 |
Dynamics of gene expression under feedback O Pulkkinen, J Berg arXiv preprint arXiv:0807.3521, 2008 | 2 | 2008 |
Zero-Range Processes and their applications O Pulkkinen Research report/Department of Physics, University of Jyväskylä, 2007 | 1 | 2007 |
State estimation of long-range correlated non-equilibrium systems: media estimation O Pulkkinen Journal of Statistical Mechanics: Theory and Experiment 2010 (03), L03003, 2010 | | 2010 |
Yksiulotteisten rajapintojen kinetiikan kuvaaminen stokastisilla hilamalleilla O Pulkkinen | | 1999 |
Supplementary Information: Variance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation O Pulkkinen, R Metzler | | |