Iñaki Ruiz-Trillo

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Arnau Sebé-PedrósCentre for Genomic Regulation (CRG)Verified email at crg.eu
Alex de MendozaLecturer at Queen Mary University of London, School of Biological and Chemical SciencesVerified email at qmul.ac.uk
Andrew RogerProfessor of Biochemistry and Molecular Biology, Dalhousie UnviersityVerified email at dal.ca
Marta RiutortUniversitat de BarcelonaVerified email at ub.edu
Xavier Grau-BovéCentre de Regulació GenòmicaVerified email at crg.cat
Jaume BagunaDpt Genètica, Universitat BarcelonaVerified email at ub.edu
Jordi PapsSenior lecturer, School of Biological Sciences, University of BristolVerified email at bristol.ac.uk
B. Franz LangBiochimie, Universite de MontrealVerified email at umontreal.ca
Javier del CampoGroup Leader, Institute of Evolutionary Biology (CSIC - Universitat Pompeu Fabra)Verified email at ibe.upf-csic.es
Nicole KingInvestigator, HHMI and Professor, MCB, University of California, BerkeleyVerified email at berkeley.edu
Ulf JondeliusProfessor, Naturhistoriska riksmuseetVerified email at nrm.se
Ramon MassanaInstitut de Ciències del Mar, CSICVerified email at icm.csic.es
DTJ LittlewoodResearcher, Natural History Museum, LondonVerified email at nhm.ac.uk
Gertraud BurgerRobert-Cedergren-Centre for Bioinformatics and Genomics, Universite de MontrealVerified email at umontreal.ca
Kamran Shalchian-TabriziDepartment of Biosciences, University of OsloVerified email at ibv.uio.no
Michael W. GrayProfessor Emeritus, Dept. of Biochemistry & Molecular Biology, Dalhousie UniversityVerified email at dal.ca
Romain DerellepostdocVerified email at crg.eu
Gerard ManningDirector of Bioinformatics, GenentechVerified email at gene.com
Elisabeth HerniouCNRS - IRBI - Université de ToursVerified email at univ-tours.fr
Eric BaptesteCNRS, Université Pierre et Marie CurieVerified email at snv.jussieu.fr

Iñaki Ruiz-Trillo

ICREA research professor at Institut de Biologia Evolutiva (CSIC-UPF)

Verified email at ibe.upf-csic.es - Homepage

Evolutionary Biology Genomics Protist Cell Biology Phylogenetics


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Acoel flatworms: earliest extant bilaterian metazoans, not members of Platyhelminthes I Ruiz-Trillo, M Riutort, DTJ Littlewood, EA Herniou, J Baguñà Science 283 (5409), 1919-1923, 1999	458	1999
A phylogenomic investigation into the origin of metazoa I Ruiz-Trillo, AJ Roger, G Burger, MW Gray, BF Lang Molecular biology and evolution 25 (4), 664-672, 2008	238	2008
The Capsaspora genome reveals a complex unicellular prehistory of animals H Suga, Z Chen, A De Mendoza, A Sebé-Pedrós, MW Brown, E Kramer, ... Nature communications 4 (1), 1-9, 2013	229	2013
A phylogenetic analysis of myosin heavy chain type II sequences corroborates that Acoela and Nemertodermatida are basal bilaterians I Ruiz-Trillo, J Paps, M Loukota, C Ribera, U Jondelius, J Baguñà, ... Proceedings of the National Academy of Sciences 99 (17), 11246-11251, 2002	226	2002
Ancient origin of the integrin-mediated adhesion and signaling machinery A Sebé-Pedrós, AJ Roger, FB Lang, N King, I Ruiz-Trillo Proceedings of the National Academy of Sciences 107 (22), 10142-10147, 2010	224	2010
The origins of multicellularity: a multi-taxon genome initiative I Ruiz-Trillo, G Burger, PWH Holland, N King, BF Lang, AJ Roger, ... TRENDS in Genetics 23 (3), 113-118, 2007	195	2007
Unexpected Repertoire of Metazoan Transcription Factors in the Unicellular Holozoan Capsaspora owczarzaki A Sebé-Pedrós, A de Mendoza, BF Lang, BM Degnan, I Ruiz-Trillo Molecular biology and evolution 28 (3), 1241-1254, 2011	183	2011
The Nemertodermatida are basal bilaterians and not members of the Platyhelminthes U Jondelius, I Ruiz‐Trillo, J Baguñà, M Riutort Zoologica Scripta 31 (2), 201-215, 2002	176	2002
Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages A de Mendoza, A Sebé-Pedrós, MS Šestak, M Matejčić, G Torruella, ... Proceedings of the National Academy of Sciences 110 (50), E4858-E4866, 2013	157	2013
Phylogenetic relationships within the Opisthokonta based on phylogenomic analyses of conserved single-copy protein domains G Torruella, R Derelle, J Paps, BF Lang, AJ Roger, K Shalchian-Tabrizi, ... Molecular biology and evolution 29 (2), 531-544, 2012	156	2012
The origin of Metazoa: a unicellular perspective A Sebé-Pedrós, BM Degnan, I Ruiz-Trillo Nature Reviews Genetics 18 (8), 498, 2017	152	2017
The others: our biased perspective of eukaryotic genomes J del Campo, ME Sieracki, R Molestina, P Keeling, R Massana, ... Trends in ecology & evolution 29 (5), 252-259, 2014	140	2014
Regulated aggregative multicellularity in a close unicellular relative of metazoa A Sebé-Pedrós, M Irimia, J Del Campo, H Parra-Acero, C Russ, ... Elife 2, e01287, 2013	117	2013
Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi G Torruella, A De Mendoza, X Grau-Bové, M Antó, MA Chaplin, ... Current Biology 25 (18), 2404-2410, 2015	110	2015
The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity A Sebé-Pedrós, C Ballaré, H Parra-Acero, C Chiva, JJ Tena, E Sabidó, ... Cell 165 (5), 1224-1237, 2016	107	2016
The evolution of the GPCR signaling system in eukaryotes: modularity, conservation, and the transition to metazoan multicellularity A De Mendoza, A Sebé-Pedrós, I Ruiz-Trillo Genome biology and evolution 6 (3), 606-619, 2014	107	2014
Mitochondrial genome data support the basal position of Acoelomorpha and the polyphyly of the Platyhelminthes I Ruiz-Trillo, M Riutort, HM Fourcade, J Baguñà, JL Boore Molecular Phylogenetics and Evolution 33 (2), 321-332, 2004	105	2004
Genomic survey of premetazoans shows deep conservation of cytoplasmic tyrosine kinases and multiple radiations of receptor tyrosine kinases H Suga, M Dacre, A de Mendoza, K Shalchian-Tabrizi, G Manning, ... Science signaling 5 (222), ra35-ra35, 2012	104	2012
Evolution and classification of myosins, a paneukaryotic whole-genome approach A Sebé-Pedrós, X Grau-Bové, TA Richards, I Ruiz-Trillo Genome biology and evolution 6 (2), 290-305, 2014	101	2014
Sterol and genomic analyses validate the sponge biomarker hypothesis DA Gold, J Grabenstatter, A De Mendoza, A Riesgo, I Ruiz-Trillo, ... Proceedings of the National Academy of Sciences 113 (10), 2684-2689, 2016	94	2016

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