Tim van Opijnen
Tim van Opijnen
Associate Professor of Microbial Systems Biology
Geverifieerd e-mailadres voor bc.edu - Homepage
Geciteerd door
Geciteerd door
Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms
T Van Opijnen, KL Bodi, A Camilli
Nature methods 6 (10), 767-772, 2009
Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
T Van Opijnen, A Camilli
Nature Reviews Microbiology 11 (7), 435-442, 2013
A fine scale phenotype–genotype virulence map of a bacterial pathogen
T van Opijnen, A Camilli
Genome research 22 (12), 2541-2551, 2012
Control of virulence by small RNAs in Streptococcus pneumoniae
B Mann, T van Opijnen, J Wang, C Obert, YD Wang, R Carter, ...
PLoS Pathog 8 (7), e1002788, 2012
High temperatures eliminate Wolbachia, a cytoplasmic incompatibility inducing endosymbiont, from the two-spotted spider mite
T Van Opijnen, JAJ Breeuwer
Experimental & applied acarology 23 (11), 871-881, 1999
Genome‐wide fitness and genetic interactions determined by Tn‐seq, a high‐throughput massively parallel sequencing method for microorganisms
T van Opijnen, DW Lazinski, A Camilli
Current protocols in molecular biology 106 (1), 7.16. 1-7.16. 24, 2014
Human immunodeficiency virus type 1 subtypes have a distinct long terminal repeat that determines the replication rate in a host-cell-specific manner
T van Opijnen, RE Jeeninga, MC Boerlijst, GP Pollakis, V Zetterberg, ...
Journal of virology 78 (7), 3675-3683, 2004
AFLP fingerprinting for assessing intraspecific variation and genome mapping in mites
AR Weeks, T Van Opijnen, JAJ Breeuwer
Experimental & applied acarology 24 (10), 775-793, 2000
Genomic analyses of pneumococci from children with sickle cell disease expose host-specific bacterial adaptations and deficits in current interventions
R Carter, J Wolf, T van Opijnen, M Muller, C Obert, C Burnham, B Mann, ...
Cell host & microbe 15 (5), 587-599, 2014
The human immunodeficiency virus type 1 promoter contains a CATA box instead of a TATA box for optimal transcription and replication
T Van Opijnen, J Kamoschinski, RE Jeeninga, B Berkhout
Journal of virology 78 (13), 6883-6890, 2004
Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments
T van Opijnen, MC Boerlijst, B Berkhout
Journal of virology 80 (13), 6678-6685, 2006
Genetics of female mate discrimination of heterospecific males in Nasonia (Hymenoptera, Pteromalidae)
BJ Velthuis, W Yang, T Van Opijnen, JH Werren
Animal behaviour 69 (5), 1107-1120, 2005
Antibiotics disrupt coordination between transcriptional and phenotypic stress responses in pathogenic bacteria
PA Jensen, Z Zhu, T van Opijnen
Cell reports 20 (7), 1705-1716, 2017
Strain dependent genetic networks for antibiotic-sensitivity in a bacterial pathogen with a large pan-genome
T van Opijnen, S Dedrick, J Bento
PLoS pathogens 12 (9), e1005869, 2016
The host environment drives HIV‐1 fitness
T van Opijnen, B Berkhout
Reviews in medical virology 15 (4), 219-233, 2005
Genetic conflicts over sex ratio: mite-endosymbiont interactions
F Vala, T Van Opijnen, JAJ Breeuwer, MW Sabelis
The American Naturalist 161 (2), 254-266, 2003
Phage display of dynamic covalent binding motifs enables facile development of targeted antibiotics
KA McCarthy, MA Kelly, K Li, S Cambray, AS Hosseini, T van Opijnen, ...
Journal of the American Chemical Society 140 (19), 6137-6145, 2018
Adaptation of HIV-1 depends on the host-cell environment
T Van Opijnen, A De Ronde, MC Boerlijst, B Berkhout
PLoS One 2 (3), e271, 2007
Genetic variability in the three genomes of Nasonia: nuclear, mitochondrial and Wolbachia
T Van Opijnen, E Baudry, L Baldo, J Bartos, JH Werren
Insect molecular biology 14 (6), 653-663, 2005
MAGenTA: a Galaxy implemented tool for complete Tn-Seq analysis and data visualization
KM McCoy, ML Antonio, T van Opijnen
Bioinformatics 33 (17), 2781-2783, 2017
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