| Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism AJ Willsey, SJ Sanders, M Li, S Dong, AT Tebbenkamp, RA Muhle, ... Cell 155 (5), 997-1007, 2013 | 1009 | 2013 |
| Genomic Analysis of Non-NF2 Meningiomas Reveals Mutations in TRAF7, KLF4, AKT1, and SMO VE Clark, EZ Erson-Omay, A Serin, J Yin, J Cotney, K Özduman, T Avşar, ... Science 339 (6123), 1077-1080, 2013 | 888 | 2013 |
| The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment J Cotney, RA Muhle, SJ Sanders, L Liu, AJ Willsey, W Niu, W Liu, L Klei, ... Nature communications 6 (1), 6404, 2015 | 368 | 2015 |
| Evolutionary changes in promoter and enhancer activity during human corticogenesis SK Reilly, J Yin, AE Ayoub, D Emera, J Leng, J Cotney, R Sarro, P Rakic, ... Science 347 (6226), 1155-1159, 2015 | 306 | 2015 |
| The evolution of lineage-specific regulatory activities in the human embryonic limb J Cotney, J Leng, J Yin, SK Reilly, LE DeMare, D Emera, AE Ayoub, ... Cell 154 (1), 185-196, 2013 | 260 | 2013 |
| Mitochondrial stress engages E2F1 apoptotic signaling to cause deafness N Raimundo, L Song, TE Shutt, SE McKay, J Cotney, MX Guan, ... Cell 148 (4), 716-726, 2012 | 229 | 2012 |
| Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb J Cotney, J Leng, S Oh, LE DeMare, SK Reilly, MB Gerstein, JP Noonan Genome research 22 (6), 1069-1080, 2012 | 159 | 2012 |
| The genomic landscape of cohesin-associated chromatin interactions LE DeMare, J Leng, J Cotney, SK Reilly, J Yin, R Sarro, JP Noonan Genome research 23 (8), 1224-1234, 2013 | 152 | 2013 |
| Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression J Cotney, Z Wang, GS Shadel Nucleic acids research 35 (12), 4042-4054, 2007 | 152 | 2007 |
| Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing AE Ayoub, S Oh, Y Xie, J Leng, J Cotney, MH Dominguez, JP Noonan, ... Proceedings of the National Academy of Sciences 108 (36), 14950-14955, 2011 | 149 | 2011 |
| Core human mitochondrial transcription apparatus is a regulated two-component system in vitro TE Shutt, MF Lodeiro, J Cotney, CE Cameron, GS Shadel Proceedings of the National Academy of Sciences 107 (27), 12133-12138, 2010 | 135 | 2010 |
| High-resolution epigenomic atlas of human embryonic craniofacial development A Wilderman, J VanOudenhove, J Kron, JP Noonan, J Cotney Cell reports 23 (5), 1581-1597, 2018 | 132 | 2018 |
| Human mitochondrial ribosomal protein MRPL12 interacts directly with mitochondrial RNA polymerase to modulate mitochondrial gene expression Z Wang, J Cotney, GS Shadel Journal of Biological Chemistry 282 (17), 12610-12618, 2007 | 118 | 2007 |
| Evidence for an early gene duplication event in the evolution of the mitochondrial transcription factor B family and maintenance of rRNA methyltransferase activity in human … J Cotney, GS Shadel Journal of molecular evolution 63, 707-717, 2006 | 104 | 2006 |
| Massively parallel discovery of human-specific substitutions that alter enhancer activity S Uebbing, J Gockley, SK Reilly, AA Kocher, E Geller, N Gandotra, ... Proceedings of the National Academy of Sciences 118 (2), e2007049118, 2021 | 101 | 2021 |
| Elucidation of separate, but collaborative functions of the rRNA methyltransferase-related human mitochondrial transcription factors B1 and B2 in mitochondrial biogenesis … J Cotney, SE McKay, GS Shadel Human molecular genetics 18 (14), 2670-2682, 2009 | 99 | 2009 |
| Mitochondrial ribosomal protein L12 selectively associates with human mitochondrial RNA polymerase to activate transcription YV Surovtseva, TE Shutt, J Cotney, H Cimen, SY Chen, EC Koc, ... Proceedings of the National Academy of Sciences 108 (44), 17921-17926, 2011 | 95 | 2011 |
| RNA-Seq profiling of spinal cord motor neurons from a presymptomatic SOD1 ALS mouse U Bandyopadhyay, J Cotney, M Nagy, S Oh, J Leng, M Mahajan, S Mane, ... PLoS One 8 (1), e53575, 2013 | 78 | 2013 |
| Marked diversity of unique cortical enhancers enables neuron-specific tools by enhancer-driven gene expression S Blankvoort, MP Witter, J Noonan, J Cotney, C Kentros Current Biology 28 (13), 2103-2114. e5, 2018 | 70 | 2018 |
| A bipartite boundary element restricts UBE3A imprinting to mature neurons JS Hsiao, ND Germain, A Wilderman, C Stoddard, LA Wojenski, ... Proceedings of the National Academy of Sciences 116 (6), 2181-2186, 2019 | 62 | 2019 |
James P NoonanAlbert E. Kent Professor of Genetics and Professor of Neuroscience, Yale School of MedicineVerified email at yale.edu
