Cenk Sahinalp

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	Alles	Sinds 2016
Citaties	19050	8915
h-index	52	38
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Medeauteurs

Fereydoun HormozdiariAssistant Professor at University of California - DavisGeverifieerd e-mailadres voor ucdavis.edu
Can AlkanBilkent University, Ankara, TurkeyGeverifieerd e-mailadres voor cs.bilkent.edu.tr
Evan EichlerProfessor of Genome Sciences, University of WashingtonGeverifieerd e-mailadres voor gs.washington.edu
Faraz HachAssistant Professor at University of British ColumbiaGeverifieerd e-mailadres voor ubc.ca
The Phuong DaoMemorial Sloan Kettering Cancer CenterGeverifieerd e-mailadres voor mskcc.org
Colin Collins, PhDProfessor of Urologic Sciences, University of British Columbia and Vancouver Prostate CentreGeverifieerd e-mailadres voor prostatecentre.com
Andrew McPhersonPost Doctoral Fellow, University of British ColumbiaGeverifieerd e-mailadres voor bccrc.ca
Iman HajirasoulihaAssistant Professor, Weill Cornell Medicine of Cornell University, New York CityGeverifieerd e-mailadres voor med.cornell.edu
Raheleh SalariNatera IncGeverifieerd e-mailadres voor natera.com
Sohrab ShahMemorial Sloan Kettering Cancer CenterGeverifieerd e-mailadres voor mskcc.org
Salem MalikicStaff Scientist, Cancer Data Science Lab, National Cancer InstituteGeverifieerd e-mailadres voor nih.gov
Martin EsterProfessor of Computer Science, Simon Fraser UniversityGeverifieerd e-mailadres voor cs.sfu.ca
Emre KarakocPrincipal Bioinformatician, Wellcome Sanger InstituteGeverifieerd e-mailadres voor sanger.ac.uk
Rolf BackofenProfessor für Bioinformatik, Universität FreiburgGeverifieerd e-mailadres voor informatik.uni-freiburg.de
Ibrahim NumanagićUniversity of VictoriaGeverifieerd e-mailadres voor uvic.ca
Uzi VishkinProfessor, The University of Maryland Institute for Advanced Computer Studies (UMIACS) andGeverifieerd e-mailadres voor umd.edu
Artem CherkasovUniversity of British ColumbiaGeverifieerd e-mailadres voor interchange.ubc.ca
Peter UnrauProfessor, MBB, Simon Fraser UniversityGeverifieerd e-mailadres voor sfu.ca
Hamidreza ChitsazWaymoGeverifieerd e-mailadres voor algorithmicslab.org
Jeffrey M KiddAssociate Professor of Human Genetics, University of MichiganGeverifieerd e-mailadres voor umich.edu

Cenk Sahinalp

Senior Investigator, Cancer Data Science Lab, National Cancer Institute, NIH

Geverifieerd e-mailadres voor nih.gov - Homepage

Bioinformatics Computational Biology Genomics Cancer Algorithms


Titel Sorteren op citaties Sorteren op jaar Sorteren op titel	Geciteerd door Geciteerd door	Jaar
A map of human genome variation from population-scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061, 2010	7306	2010
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes NY Yu, JR Wagner, MR Laird, G Melli, S Rey, R Lo, P Dao, SC Sahinalp, ... Bioinformatics 26 (13), 1608-1615, 2010	1646	2010
Personalized copy number and segmental duplication maps using next-generation sequencing C Alkan, JM Kidd, T Marques-Bonet, G Aksay, F Antonacci, F Hormozdiari, ... Nature genetics 41 (10), 1061, 2009	817	2009
Demographic history and rare allele sharing among human populations S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ... Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011	554	2011
deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data A McPherson, F Hormozdiari, A Zayed, R Giuliany, G Ha, MGF Sun, ... PLoS Comput Biol 7 (5), e1001138, 2011	501	2011
Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes F Hormozdiari, C Alkan, EE Eichler, SC Sahinalp Genome research 19 (7), 1270-1278, 2009	367	2009
Spatial genomic heterogeneity within localized, multifocal prostate cancer PC Boutros, M Fraser, NJ Harding, R De Borja, D Trudel, E Lalonde, ... Nature genetics 47 (7), 736-745, 2015	341	2015
Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa RD Morin, G Aksay, E Dolgosheina, HA Ebhardt, V Magrini, ER Mardis, ... Genome research 18 (4), 571-584, 2008	317	2008
Genomic hallmarks of localized, non-indolent prostate cancer M Fraser, VY Sabelnykova, TN Yamaguchi, LE Heisler, J Livingstone, ... Nature 541 (7637), 359-364, 2017	316	2017
mrsFAST: a cache-oblivious algorithm for short-read mapping F Hach, F Hormozdiari, C Alkan, F Hormozdiari, I Birol, EE Eichler, ... Nature methods 7 (8), 576-577, 2010	302	2010
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery F Hormozdiari, I Hajirasouliha, P Dao, F Hach, D Yorukoglu, C Alkan, ... Bioinformatics 26 (12), i350-i357, 2010	248	2010
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020	229	2020
Applicability domains for classification problems: benchmarking of distance to models for Ames mutagenicity set I Sushko, S Novotarskyi, R Körner, AK Pandey, A Cherkasov, J Li, ... Journal of chemical information and modeling 50 (12), 2094-2111, 2010	195	2010
The structure and evolution of centromeric transition regions within the human genome X She, JE Horvath, Z Jiang, G Liu, TS Furey, L Christ, R Clark, T Graves, ... Nature 430 (7002), 857-864, 2004	185	2004
Biomolecular network motif counting and discovery by color coding N Alon, P Dao, I Hajirasouliha, F Hormozdiari, SC Sahinalp Bioinformatics 24 (13), i241-i249, 2008	173	2008
From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer AV Lapuk, C Wu, AW Wyatt, A McPherson, BJ McConeghy, S Brahmbhatt, ... The Journal of pathology 227 (3), 286-297, 2012	163	2012
Communication complexity of document exchange G Cormode, M Paterson, SC Sahinalp, U Vishkin Proc. of the 11th ACM-SIAM Annual Symposium on Discrete Algorithms, 197-206, 2000	162	2000
Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome G Liu, S Zhao, JA Bailey, SC Sahinalp, C Alkan, E Tuzun, ED Green, ... Genome research 13 (3), 358-368, 2003	160	2003
Efficient approximate and dynamic matching of patterns using a labeling paradigm SC Sahinalp, U Vishkin Proceedings of 37th Conference on Foundations of Computer Science, 320-328, 1996	154	1996
RNA–RNA interaction prediction and antisense RNA target search C Alkan, E Karakoc, JH Nadeau, SC Sahinalp, K Zhang Journal of Computational Biology 13 (2), 267-282, 2006	149	2006

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