| CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions Y Liu, A Wirawan, B Schmidt BMC bioinformatics 14, 1-10, 2013 | 298 | 2013 |
| Review of tandem repeat search tools: a systematic approach to evaluating algorithmic performance KG Lim, CK Kwoh, LY Hsu, A Wirawan Briefings in bioinformatics 14 (1), 67-81, 2013 | 106 | 2013 |
| CBESW: sequence alignment on the playstation 3 A Wirawan, CK Kwoh, NT Hieu, B Schmidt BMC bioinformatics 9, 1-10, 2008 | 73 | 2008 |
| HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data A Wirawan, RS Harris, Y Liu, B Schmidt, J Schröder BMC bioinformatics 15, 1-13, 2014 | 45 | 2014 |
| MRMR optimized classification for automatic glaucoma diagnosis Z Zhang, CK Kwoh, J Liu, F Yin, A Wirawan, C Cheung, M Baskaran, ... 2011 Annual International Conference of the IEEE Engineering in Medicine and …, 2011 | 29 | 2011 |
| Parallel DNA sequence alignment on the cell broadband engine A Wirawan, KC Keong, B Schmidt International Conference on Parallel Processing and Applied Mathematics …, 2007 | 28 | 2007 |
| INVERTER: integrated variable number tandem repeat finder A Wirawan, CK Kwoh, LY Hsu, TH Koh Computational Systems-Biology and Bioinformatics: First International …, 2010 | 17 | 2010 |
| Pairwise distance matrix computation for multiple sequence alignment on the cell broadband engine A Wirawan, B Schmidt, CK Kwoh Computational Science–ICCS 2009: 9th International Conference Baton Rouge …, 2009 | 17 | 2009 |
| CLOVE: classification of genomic fusions into structural variation events J Schröder, A Wirawan, B Schmidt, AT Papenfuss BMC bioinformatics 18, 1-10, 2017 | 13 | 2017 |
| High performance protein sequence database scanning on the Cell Broadband Engine A Wirawan, B Schmidt, H Zhang, CK Kwoh Scientific Programming 17 (1-2), 97-111, 2009 | 13 | 2009 |
| Feature selection for computer-aided angle closure glaucoma mechanism detection A Wirawan, CK Kwoh, PTK Chew, MCD Aquino, SC Loon, J See, C Zheng, ... Journal of Medical Imaging and Health Informatics 2 (4), 438-444, 2012 | 11 | 2012 |
| Multi-threaded vectorized distance matrix computation on the CELL/BE and x86/SSE2 architectures A Wirawan, CK Kwoh, B Schmidt Bioinformatics 26 (10), 1368-1369, 2010 | 9 | 2010 |
| Applications of heterogeneous structure of Cell Broadband Engine Architecture for biological database similarity search NT Hieu, KC Keong, A Wirawan, B Schmidt 2008 2nd International Conference on Bioinformatics and Biomedical …, 2008 | 6 | 2008 |
| CLOVE: classification of genomic fusions into structural variation events A Wirawan, B Schmidt, AT Papenfuss BMC Bioinformatics 18 (1), 2017 | | 2017 |
| HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data J Schröder, B Schmidt, Y Liu, RS Harris, A Wirawan | | 2014 |
| Heterogeneous multi-core systems for bioinformatics A Wirawan | | 2010 |
| Parallel Discovery of Transcription Factor Binding Sites A Wirawan, B Schmidt APCCAS 2006-2006 IEEE Asia Pacific Conference on Circuits and Systems, 700-703, 2006 | | 2006 |
