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| Gaussian 09; Gaussian, Inc MJ Frisch, GW Trucks, HB Schlegel, GE Scuseria, MA Robb, ... Wallingford, CT 32, 5648-5652, 2009 | 4723* | 2009 |
| GENCODE: the reference human genome annotation for The ENCODE Project J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ... Genome research 22 (9), 1760-1774, 2012 | 3775 | 2012 |
| Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ... Human molecular genetics 23 (22), 5866-5878, 2014 | 578 | 2014 |
| Progress and challenges in predicting protein–protein interaction sites I Ezkurdia, L Bartoli, P Fariselli, R Casadio, A Valencia, ML Tress Briefings in bioinformatics 10 (3), 233-246, 2009 | 181 | 2009 |
| Assessment of predictions submitted for the CASP6 comparative modeling category M Tress, I Ezkurdia, O Grana, G López, A Valencia Proteins: Structure, Function, and Bioinformatics 61 (S7), 27-45, 2005 | 156 | 2005 |
| APPRIS: annotation of principal and alternative splice isoforms JM Rodriguez, P Maietta, I Ezkurdia, A Pietrelli, JJ Wesselink, G Lopez, ... Nucleic acids research 41 (D1), D110-D117, 2013 | 151 | 2013 |
| Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts M Frenkel-Morgenstern, V Lacroix, I Ezkurdia, Y Levin, A Gabashvili, ... Genome research 22 (7), 1231-1242, 2012 | 129 | 2012 |
| Mechanism of super-assembly of respiratory complexes III and IV S Cogliati, E Calvo, M Loureiro, AM Guaras, R Nieto-Arellano, ... Nature 539 (7630), 579-582, 2016 | 116 | 2016 |
| Analyzing the first drafts of the human proteome I Ezkurdia, J Vázquez, A Valencia, M Tress Journal of proteome research 13 (8), 3854-3855, 2014 | 104 | 2014 |
| SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ... Genome research 28 (3), 396-411, 2018 | 83 | 2018 |
| Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function I Ezkurdia, A del Pozo, A Frankish, JM Rodriguez, J Harrow, K Ashman, ... Molecular biology and evolution 29 (9), 2265-2283, 2012 | 81 | 2012 |
| Most highly expressed protein-coding genes have a single dominant isoform I Ezkurdia, JM Rodriguez, E Carrillo-de Santa Pau, J Vázquez, A Valencia, ... Journal of proteome research 14 (4), 1880-1887, 2015 | 73 | 2015 |
| Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8 I Ezkurdia, O Grana, JMG Izarzugaza, ML Tress Proteins: Structure, Function, and Bioinformatics 77 (S9), 196-209, 2009 | 71 | 2009 |
| Targeted proteome investigation via selected reaction monitoring mass spectrometry A Maiolica, MA Jünger, I Ezkurdia, R Aebersold Journal of proteomics 75 (12), 3495-3513, 2012 | 64 | 2012 |
| Alternatively spliced homologous exons have ancient origins and are highly expressed at the protein level F Abascal, I Ezkurdia, J Rodriguez-Rivas, JM Rodriguez, A del Pozo, ... PLoS Comput Biol 11 (6), e1004325, 2015 | 54 | 2015 |
| Assessment of predictions submitted for the CASP7 domain prediction category M Tress, J Cheng, P Baldi, K Joo, J Lee, JH Seo, J Lee, D Baker, ... Proteins: Structure, Function, and Bioinformatics 69 (S8), 137-151, 2007 | 46 | 2007 |
| Target domain definition and classification in CASP8 ML Tress, I Ezkurdia, JS Richardson Proteins: Structure, Function, and Bioinformatics 77 (S9), 10-17, 2009 | 40 | 2009 |
| Detection of alpha-thalassemia in beta-thalassemia carriers and prevention of Hb Bart's hydrops fetalis through prenatal screening D Li, C Liao, J Li, X Xie, Y Huang, H Zhong haematologica 91 (5), 649-651, 2006 | 40 | 2006 |
| Domain definition and target classification for CASP6 M Tress, CH Tai, G Wang, I Ezkurdia, G López, A Valencia, B Lee, ... PROTEINS: Structure, Function, and Bioinformatics 61 (S7), 8-18, 2005 | 40 | 2005 |
