Hana Imrichova
Hana Imrichova
Postdoctoral Fellow
Verified email at student.kuleuven.be
Title
Cited by
Cited by
Year
SCENIC: single-cell regulatory network inference and clustering
S Aibar, CB González-Blas, T Moerman, H Imrichova, G Hulselmans, ...
Nature methods 14 (11), 1083-1086, 2017
4952017
iRegulon: from a gene list to a gene regulatory network using large motif and track collections
A Verfaillie, H Imrichová, B Van de Sande, L Standaert, V Christiaens, ...
PLoS Comput Biol 10 (7), e1003731, 2014
4182014
Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state
A Verfaillie, H Imrichova, ZK Atak, M Dewaele, F Rambow, G Hulselmans, ...
Nature communications 6 (1), 1-16, 2015
2112015
Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells
P Laurette, T Strub, D Koludrovic, C Keime, S Le Gras, H Seberg, ...
Elife 4, e06857, 2015
1042015
i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly
H Imrichová, G Hulselmans, Z Kalender Atak, D Potier, S Aerts
Nucleic acids research 43 (W1), W57-W64, 2015
762015
The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes
J Jacobs, M Atkins, K Davie, H Imrichova, L Romanelli, V Christiaens, ...
Nature genetics 50 (7), 1011-1020, 2018
552018
Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic
A Verfaillie, D Svetlichnyy, H Imrichova, K Davie, M Fiers, ZK Atak, ...
Genome research 26 (7), 882-895, 2016
442016
Combined proteomics and transcriptomics identifies carboxypeptidase B1 and nuclear factor κB (NF-κB) associated proteins as putative biomarkers of metastasis in low grade …
P Bouchal, M Dvořáková, T Roumeliotis, Z Bortlíček, I Ihnatová, ...
Molecular & Cellular Proteomics 14 (7), 1814-1830, 2015
402015
Breast cancer classification based on proteotypes obtained by SWATH mass spectrometry
P Bouchal, OT Schubert, J Faktor, L Capkova, H Imrichova, K Zoufalova, ...
Cell reports 28 (3), 832-843. e7, 2019
212019
Identification of high-impact cis-regulatory mutations using transcription factor specific random forest models
D Svetlichnyy, H Imrichova, M Fiers, ZK Atak, S Aerts
PLoS Comput Biol 11 (11), e1004590, 2015
182015
iRegulon and i‐cisTarget: Reconstructing Regulatory Networks Using Motif and Track Enrichment
A Verfaillie, H Imrichova, R Janky, S Aerts
Current protocols in bioinformatics 52 (1), 2.16. 1-2.16. 39, 2015
152015
Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks
ZK Atak, H Imrichova, D Svetlichnyy, G Hulselmans, V Christiaens, ...
Genome medicine 9 (1), 1-13, 2017
72017
Combined proteomics and transcriptomics identifies carboxypeptidase B1 and NF-κB associated proteins as putative biomarkers of metastasis in low grade breast cancer
P Bouchal, M Dvorakova, T Roumeliotis, Z Bortlicek, I Ihnatová, ...
Molecular & Cellular Proteomics, 2015
52015
Selective Mediator dependence of cell-type-specifying transcription
MG Jaeger, B Schwalb, SD Mackowiak, T Velychko, A Hanzl, H Imrichova, ...
Nature Genetics, 1-9, 2020
12020
Disturbed mitochondrial dynamics in CD8+ TILs reinforce T cell exhaustion
YR Yu, H Imrichova, H Wang, T Chao, Z Xiao, M Gao, M Rincon-Restrepo, ...
Nature Immunology, 1-12, 2020
2020
Rational discovery of molecular glue degraders via scalable chemical profiling
C Mayor-Ruiz, S Bauer, M Brand, Z Kozicka, M Siklos, H Imrichova, ...
Nature Chemical Biology, 1-9, 2020
2020
Single-cell ATAC-seq during time-series experiment maps the regulatory dynamics of transcriptional state transition in melanoma
L Minnoye, C Bravo Gonzalez-Blas, J Wouters, Z Kalender Atak, ...
Single Cell Biology, Date: 2018/03/06-2018/03/08, Location: Wellcome Genome …, 2018
2018
ChIP-seq meta-analysis yields high quality training sets for enhancer classification
H Imrichova, S Aerts
bioRxiv, 388934, 2018
2018
Breast cancer classification based on proteotypes obtained by SWATH-MS
P Bouchal, OT Schubert, J Faktor, L Čápková, H Imrichová, K Marková, ...
2017
Klasifikace nádorů prsu na základě proteotypů získaných metodou SWATH-MS
P Bouchal, OT Schubert, J Faktor, L Čápková, H Imrichová, K Marková, ...
2017
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Articles 1–20