| Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition T Tamura, T Akutsu BMC bioinformatics 8, 1-14, 2007 | 67 | 2007 |
| Finding a periodic attractor of a Boolean network T Akutsu, S Kosub, AA Melkman, T Tamura IEEE/ACM transactions on computational biology and bioinformatics 9 (5 …, 2012 | 53 | 2012 |
| Colony-live — a high-throughput method for measuring microbial colony growth kinetics— reveals diverse growth effects of gene knockouts in Escherichia coli R Takeuchi, T Tamura, T Nakayashiki, Y Tanaka, A Muto, BL Wanner, ... BMC microbiology 14, 1-11, 2014 | 49 | 2014 |
| Detecting a singleton attractor in a Boolean network utilizing SAT algorithms T Tamura, T Akutsu IEICE Transactions on Fundamentals of Electronics, Communications and …, 2009 | 44 | 2009 |
| Completing networks using observed data T Akutsu, T Tamura, K Horimoto International Conference on Algorithmic Learning Theory, 126-140, 2009 | 40 | 2009 |
| Determining a singleton attractor of an AND/OR Boolean network in O (1.587 n) time AA Melkman, T Tamura, T Akutsu Information Processing Letters 110 (14-15), 565-569, 2010 | 39 | 2010 |
| A clique-based method for the edit distance between unordered trees and its application to analysis of glycan structures D Fukagawa, T Tamura, A Takasu, E Tomita, T Akutsu BMC bioinformatics 12, 1-9, 2011 | 35 | 2011 |
| On control of singleton attractors in multiple Boolean networks: integer programming-based method Y Qiu, T Tamura, WK Ching, T Akutsu BMC systems biology 8, 1-10, 2014 | 32 | 2014 |
| Algorithms for inference, analysis and control of Boolean networks T Akutsu, M Hayashida, T Tamura Algebraic Biology: Third International Conference, AB 2008, Castle of …, 2008 | 31 | 2008 |
| Integer programming-based approach to attractor detection and control of boolean networks T Akutsu, Y Zhao, M Hayashida, T Tamura IEICE TRANSACTIONS on Information and Systems 95 (12), 2960-2970, 2012 | 30 | 2012 |
| Exact algorithms for computing the tree edit distance between unordered trees T Akutsu, D Fukagawa, A Takasu, T Tamura Theoretical Computer Science 412 (4-5), 352-364, 2011 | 30 | 2011 |
| A clique-based method using dynamic programming for computing edit distance between unordered trees T Mori, T Tamura, D Fukagawa, A Takasu, E Tomita, T Akutsu Journal of computational biology 19 (10), 1089-1104, 2012 | 28 | 2012 |
| Determining a singleton attractor of a Boolean network with nested canalyzing functions T Akutsu, AA Melkman, T Tamura, M Yamamoto Journal of computational biology 18 (10), 1275-1290, 2011 | 27 | 2011 |
| Compound analysis via graph kernels incorporating chirality JB Brown, T Urata, T Tamura, MA Arai, T Kawabata, T Akutsu Journal of Bioinformatics and Computational Biology 8 (supp01), 63-81, 2010 | 27 | 2010 |
| Finding minimum reaction cuts of metabolic networks under a boolean model using integer programming and feedback vertex sets T Tamura, K Takemoto, T Akutsu International Journal of Knowledge Discovery in Bioinformatics (IJKDB) 1 (1 …, 2010 | 27 | 2010 |
| Finding optimal control policy in probabilistic Boolean networks with hard constraints by using integer programming and dynamic programming X Chen, T Akutsu, T Tamura, WK Ching International Journal of Data Mining and Bioinformatics 7 (3), 1-22, 2013 | 26 | 2013 |
| Circulating exosomal miRNA profiles predict the occurrence and recurrence of hepatocellular carcinoma in patients with direct-acting antiviral-induced sustained viral response S Itami-Matsumoto, M Hayakawa, S Uchida-Kobayashi, M Enomoto, ... Biomedicines 7 (4), 87, 2019 | 24 | 2019 |
| Network completion using dynamic programming and least-squares fitting N Nakajima, T Tamura, Y Yamanishi, K Horimoto, T Akutsu The Scientific World Journal 2012, 2012 | 21 | 2012 |
| Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and features Y Bao, S Marini, T Tamura, M Kamada, S Maegawa, H Hosokawa, J Song, ... Briefings in bioinformatics 20 (5), 1669-1684, 2019 | 20 | 2019 |
| Integer programming-based methods for attractor detection and control of Boolean networks T Akutsu, M Hayashida, T Tamura Proceedings of the 48h IEEE Conference on Decision and Control (CDC) held …, 2009 | 19 | 2009 |
Tatsuya AkutsuProfessor, Bioinformatics Center, Institute for Chemical Research, Kyoto UniversityGeverifieerd e-mailadres voor kuicr.kyoto-u.ac.jp
