Pieter Libin
Pieter Libin
Assistant Professor, Vrije Universiteit Brussel
Verified email at
Cited by
Cited by
Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools
AC Pineda-Pea, NR Faria, S Imbrechts, P Libin, AB Abecasis, ...
Infection, Genetics and Evolution 19, 337-348, 2013
A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences
LCJ Alcantara, S Cassol, P Libin, K Deforche, OG Pybus, M Van Ranst, ...
Nucleic acids research 37 (suppl_2), W634-W642, 2009
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research
F Hufsky, K Lamkiewicz, A Almeida, A Aouacheria, C Arighi, A Bateman, ...
Briefings in bioinformatics 22 (2), 642-663, 2021
Modeling the early phase of the Belgian COVID-19 epidemic using a stochastic compartmental model and studying its implied future trajectories
S Abrams, J Wambua, E Santermans, L Willem, E Kuylen, P Coletti, ...
Epidemics, 100449, 2021
Comparison of HIV-1 genotypic resistance test interpretation systems in predicting virological outcomes over time
D Frentz, CAB Boucher, M Assel, A De Luca, M Fabbiani, F Incardona, ...
PloS one 5 (7), e11505, 2010
Genetic diversity and selective pressure in hepatitis C virus genotypes 1–6: significance for direct-acting antiviral treatment and drug resistance
L Cuypers, G Li, P Libin, S Piampongsant, AM Vandamme, K Theys
Viruses 7 (9), 5018-5039, 2015
The impact of contact tracing and household bubbles on deconfinement strategies for COVID-19
L Willem, S Abrams, PJK Libin, P Coletti, E Kuylen, O Petrof, ...
Nature Communications 12 (1), 1-9, 2021
A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes
V Fonseca, PJK Libin, K Theys, NR Faria, MRT Nunes, MI Restovic, ...
PLoS neglected tropical diseases 13 (5), e0007231, 2019
Scalar reward is not enough: A response to Silver, Singh, Precup and Sutton (2021)
P Vamplew, BJ Smith, J Kllstrm, G Ramos, R Rădulescu, DM Roijers, ...
Autonomous Agents and Multi-Agent Systems 36 (2), 1-19, 2022
VIRULIGN: fast codon-correct alignment and annotation of viral genomes
P Libin, K Deforche, K Theys, A Abecasis
Bioinformatics 35 (10), 1763–1765, 2019
A prospect on the use of antiviral drugs to control local outbreaks of COVID-19
A Torneri, P Libin, J Vanderlocht, AM Vandamme, J Neyts, N Hens
BMC medicine 18 (1), 1-9, 2020
The impact of HIV-1 within-host evolution on transmission dynamics
K Theys, P Libin, AC Pineda-Pena, A Nowe, AM Vandamme, AB Abecasis
Current opinion in virology 28, 92-101, 2018
Deep reinforcement learning for large-scale epidemic control
P Libin, A Moonens, T Verstraeten, F Perez-Sanjines, N Hens, P Lemey, ...
arXiv preprint arXiv:2003.13676, 2020
A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies
P Coletti, P Libin, O Petrof, L Willem, S Abrams, SA Herzog, C Faes, ...
BMC infectious diseases 21 (1), 1-12, 2021
Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
PJK Libin, L Willem, T Verstraeten, A Torneri, J Vanderlocht, N Hens
PLOS Computational Biology 17 (3), e1008688, 2021
Treatment-associated polymorphisms in protease are significantly associated with higher viral load and lower CD4 count in newly diagnosed drug-naive HIV-1 infected patients
K Theys, K Deforche, J Vercauteren, P Libin, DAMC van de Vijver, J Albert, ...
Retrovirology 9 (1), 1-13, 2012
RegaDB: community-driven data management and analysis for infectious diseases
P Libin, G Beheydt, K Deforche, S Imbrechts, F Ferreira, K Van Laethem, ...
Bioinformatics 29 (11), 1477-1480, 2013
Multi-Agent Thompson Sampling for Bandit Applications with Sparse Neighbourhood Structures
T Verstraeten, E Bargiacchi, PJK Libin, J Helsen, DM Roijers, A Now
Scientific Reports 10 (1), 1-13, 2020
SANTA-SIM: simulating viral sequence evolution dynamics under selection and recombination
A Jariani, C Warth, K Deforche, P Libin, AJ Drummond, A Rambaut, ...
Virus Evolution 5 (1), vez003, 2019
Comparative performance of the REGA subtyping tool version 2 versus version 1
AB Abecasis, Y Wang, P Libin, S Imbrechts, T de Oliveira, RJ Camacho, ...
Infection, Genetics and Evolution 10 (3), 380-385, 2010
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