David Juan
David Juan
Institut de Biologia Evolutiva (UPF-CSIC)
Geverifieerd e-mailadres voor upf.edu
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Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
Human molecular genetics 23 (22), 5866-5878, 2014
5942014
The allelic landscape of human blood cell trait variation and links to common complex disease
WJ Astle, H Elding, T Jiang, D Allen, D Ruklisa, AL Mann, D Mead, ...
Cell 167 (5), 1415-1429. e19, 2016
5502016
Emerging methods in protein co-evolution
D De Juan, F Pazos, A Valencia
Nature Reviews Genetics 14 (4), 249-261, 2013
4892013
Identification of amino acid residues crucial for chemokine receptor dimerization
P Hernanz-Falcon, JM Rodriguez-Frade, A Serrano, D Juan, A Del Sol, ...
Nature immunology 5 (2), 216-223, 2004
2082004
High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
D Juan, F Pazos, A Valencia
Proceedings of the National Academy of Sciences 105 (3), 934-939, 2008
1852008
Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome
F Pazos, JAG Ranea, D Juan, MJE Sternberg
Journal of molecular biology 352 (4), 1002-1015, 2005
1502005
Protein interactions and ligand binding: from protein subfamilies to functional specificity
A Rausell, D Juan, F Pazos, A Valencia
Proceedings of the National Academy of Sciences 107 (5), 1995-2000, 2010
1292010
Spatiotemporal transcriptomic divergence across human and macaque brain development
Y Zhu, AMM Sousa, T Gao, M Skarica, M Li, G Santpere, ...
Science 362 (6420), 2018
952018
Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types
S Ecker, L Chen, V Pancaldi, FO Bagger, JM Fernández, ...
Genome biology 18 (1), 1-17, 2017
612017
Scoring docking models with evolutionary information
M Tress, D de Juan, O Graña, MJ Gómez, P Gómez‐Puertas, ...
Proteins: Structure, Function, and Bioinformatics 60 (2), 275-280, 2005
512005
Co-evolution and co-adaptation in protein networks
D Juan, F Pazos, A Valencia
FEBS letters 582 (8), 1225-1230, 2008
492008
Subfunctionalization via adaptive evolution influenced by genomic context: the case of histone chaperones ASF1a and ASF1b
F Abascal, A Corpet, ZA Gurard-Levin, D Juan, F Ochsenbein, D Rico, ...
Molecular biology and evolution 30 (8), 1853-1866, 2013
452013
Epigenomic co-localization and co-evolution reveal a key role for 5hmC as a communication hub in the chromatin network of ESCs
D Juan, J Perner, EC de Santa Pau, S Marsili, D Ochoa, HR Chung, ...
Cell reports 14 (5), 1246-1257, 2016
442016
EcID. A database for the inference of functional interactions in E. coli
E Andres Leon, I Ezkurdia, B García, A Valencia, D Juan
Nucleic Acids Research 37 (suppl_1), D629-D635, 2009
362009
Transcriptional dissection of pancreatic tumors engrafted in mice
R Martinez-Garcia, D Juan, A Rausell, M Muñoz, N Baños, C Menéndez, ...
Genome medicine 6 (4), 27, 2014
342014
Loose ends: almost one in five human genes still have unresolved coding status
F Abascal, D Juan, I Jungreis, L Martinez, M Rigau, JM Rodriguez, ...
Nucleic acids research 46 (14), 7070-7084, 2018
332018
Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity
V Pancaldi, E Carrillo-de-Santa-Pau, BM Javierre, D Juan, P Fraser, ...
Genome biology 17 (1), 1-19, 2016
312016
TreeDet: a web server to explore sequence space
A Carro, M Tress, D De Juan, F Pazos, P Lopez-Romero, A Del Sol, ...
Nucleic acids research 34 (suppl_2), W110-W115, 2006
312006
Prediction of protein interaction based on similarity of phylogenetic trees
F Pazos, D Juan, JMG Izarzugaza, E Leon, A Valencia
Functional Proteomics, 523-535, 2008
302008
Selective single molecule sequencing and assembly of a human Y chromosome of African origin
LFK Kuderna, E Lizano, E Julià, J Gomez-Garrido, A Serres-Armero, ...
Nature communications 10 (1), 1-8, 2019
282019
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Artikelen 1–20