| Twister: a runtime for iterative mapreduce J Ekanayake, H Li, B Zhang, T Gunarathne, SH Bae, J Qiu, G Fox Proceedings of the 19th ACM international symposium on high performance …, 2010 | 1286 | 2010 |
| Cloud computing paradigms for pleasingly parallel biomedical applications T Gunarathne, TL Wu, J Qiu, G Fox Proceedings of the 19th ACM International Symposium on High Performance …, 2010 | 164 | 2010 |
| Hybrid cloud and cluster computing paradigms for life science applications J Qiu, J Ekanayake, T Gunarathne, JY Choi, SH Bae, H Li, B Zhang, ... BMC bioinformatics 11, 1-6, 2010 | 102 | 2010 |
| Dimension reduction and visualization of large high-dimensional data via interpolation SH Bae, JY Choi, J Qiu, GC Fox Proceedings of the 19th ACM international symposium on high performance …, 2010 | 80 | 2010 |
| Parallel data mining from multicore to cloudy grids G Fox, SH Bae, J Ekanayake, X Qiu, H Yuan High Speed and Large Scale Scientific Computing, 311-340, 2009 | 54 | 2009 |
| Scalable and efficient flow-based community detection for large-scale graph analysis SH Bae, D Halperin, JD West, M Rosvall, B Howe ACM Transactions on Knowledge Discovery from Data (TKDD) 11 (3), 1-30, 2017 | 47 | 2017 |
| GossipMap: a distributed community detection algorithm for billion-edge directed graphs SH Bae, B Howe Proceedings of the international conference for high performance computing …, 2015 | 44 | 2015 |
| Scalable flow-based community detection for large-scale network analysis SH Bae, D Halperin, J West, M Rosvall, B Howe 2013 IEEE 13th international conference on data mining workshops, 303-310, 2013 | 37 | 2013 |
| High performance dimension reduction and visualization for large high-dimensional data analysis JY Choi, SH Bae, X Qiu, G Fox 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid …, 2010 | 36 | 2010 |
| DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences Y Ruan, S Ekanayake, M Rho, H Tang, SH Bae, J Qiu, G Fox Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012 | 30 | 2012 |
| Parallel data mining on multicore clusters X Qiu, G Fox, H Yuan, SH Bae, G Chrysanthakopoulos, H Nielsen 2008 Seventh International Conference on Grid and Cooperative Computing, 41-49, 2008 | 29 | 2008 |
| Data intensive computing for bioinformatics J Qiu, J Ekanayake, T Gunarathne, JY Choi, SH Bae, Y Ruan, ... Data Intensive Distributed Computing: Challenges and Solutions for Large …, 2012 | 24 | 2012 |
| Performance of windows multicore systems on threading and mpi J Qiu, S Beason, SH Bae, S Ekanayake, G Fox 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid …, 2010 | 23 | 2010 |
| Multidimensional scaling by deterministic annealing with iterative majorization algorithm SH Bae, J Qiu, GC Fox 2010 IEEE sixth international conference on e-Science, 222-229, 2010 | 18 | 2010 |
| Applicability of DryadLINQ to scientific applications J Ekanayake, T Gunarathne, J Qiu, G Fox, S Beason, JY Choi, Y Ruan, ... Community Grids Laboratory, Indiana University, 2010 | 18 | 2010 |
| High performance multi-paradigm messaging runtime integrating grids and multicore systems X Qiu, GC Fox, H Yuan, SH Bae, G Chrysanthakopoulos, HF Nielsen Third IEEE International Conference on e-Science and Grid Computing (e …, 2007 | 18 | 2007 |
| Adaptive interpolation of multidimensional scaling SH Bae, J Qiu, G Fox Procedia Computer Science 9, 393-402, 2012 | 17 | 2012 |
| Performance of multicore systems on parallel data clustering with deterministic annealing X Qiu, GC Fox, H Yuan, SH Bae, G Chrysanthakopoulos, HF Nielsen Computational Science–ICCS 2008: 8th International Conference, Kraków …, 2008 | 16* | 2008 |
| Parallel multidimensional scaling performance on multicore systems SH Bae 2008 IEEE Fourth International Conference on eScience, 695-702, 2008 | 15 | 2008 |
| High performance multidimensional scaling for large high-dimensional data visualization SH Bae, J Qiu, G Fox IEEE transaction of parallel and distributed system, 2012 | 14 | 2012 |
Geoffrey FoxProfessor of Computer Science, University of Virginia, Biocomplexity InstituteVerified email at virginia.edu
