Rasmus Nielsen
Cited by
Cited by
A metagenome-wide association study of gut microbiota in type 2 diabetes
J Qin, Y Li, Z Cai, S Li, J Zhu, F Zhang, S Liang, W Zhang, Y Guan, ...
nature 490 (7418), 55-60, 2012
A draft sequence of the Neandertal genome
RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ...
science 328 (5979), 710-722, 2010
Bayesian inference of phylogeny and its impact on evolutionary biology
JP Huelsenbeck, F Ronquist, R Nielsen, JP Bollback
science 294 (5550), 2310-2314, 2001
Codon-substitution models for heterogeneous selection pressure at amino acid sites
Z Yang, R Nielsen, N Goldman, AMK Pedersen
Genetics 155 (1), 431-449, 2000
ANGSD: analysis of next generation sequencing data
TS Korneliussen, A Albrechtsen, R Nielsen
BMC bioinformatics 15, 1-13, 2014
Bayes empirical Bayes inference of amino acid sites under positive selection
Z Yang, WSW Wong, R Nielsen
Molecular biology and evolution 22 (4), 1107-1118, 2005
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-18, 2007
Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
R Nielsen, Z Yang
Genetics 148 (3), 929-936, 1998
Molecular signatures of natural selection
R Nielsen
Annu. Rev. Genet. 39, 197-218, 2005
Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level
J Zhang, R Nielsen, Z Yang
Molecular biology and evolution 22 (12), 2472-2479, 2005
Population genomics of bronze age Eurasia
ME Allentoft, M Sikora, KG Sjögren, S Rasmussen, M Rasmussen, ...
Nature 522 (7555), 167-172, 2015
Genotype and SNP calling from next-generation sequencing data
R Nielsen, JS Paul, A Albrechtsen, YS Song
Nature Reviews Genetics 12 (6), 443-451, 2011
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
Z Yang, R Nielsen
Molecular biology and evolution 17 (1), 32-43, 2000
Sequencing of 50 human exomes reveals adaptation to high altitude
X Yi, Y Liang, E Huerta-Sanchez, X Jin, ZXP Cuo, JE Pool, X Xu, H Jiang, ...
science 329 (5987), 75-78, 2010
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis
J Hey, R Nielsen
Genetics 167 (2), 747-760, 2004
Distinguishing migration from isolation: a Markov chain Monte Carlo approach
R Nielsen, J Wakeley
Genetics 158 (2), 885-896, 2001
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
science 316 (5822), 222-234, 2007
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
Z Yang, R Nielsen
Molecular biology and evolution 19 (6), 908-917, 2002
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
The evolution of gene expression levels in mammalian organs
D Brawand, M Soumillon, A Necsulea, P Julien, G Csárdi, P Harrigan, ...
Nature 478 (7369), 343-348, 2011
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