| Evolution and epidemic spread of SARS-CoV-2 in Brazil DS Candido, IM Claro, JG De Jesus, WM Souza, FRR Moreira, ... Science 369 (6508), 1255-1260, 2020 | 619 | 2020 |
| Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular biology and evolution 30 (3), 713-724, 2013 | 493 | 2013 |
| Untangling introductions and persistence in COVID-19 resurgence in Europe P Lemey, N Ruktanonchai, SL Hong, V Colizza, C Poletto, ... Nature 595 (7869), 713-717, 2021 | 122 | 2021 |
| A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages S Dellicour, K Durkin, SL Hong, B Vanmechelen, J Martí-Carreras, MS Gill, ... Molecular biology and evolution 38 (4), 1608-1613, 2021 | 89 | 2021 |
| Understanding past population dynamics: Bayesian coalescent-based modeling with covariates MS Gill, P Lemey, SN Bennett, R Biek, MA Suchard Systematic biology 65 (6), 1041-1056, 2016 | 66 | 2016 |
| Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network. Evolution and epidemic spread of SARS-CoV-2 in Brazil DS Candido, IM Claro, JG de Jesus, WM Souza, FRR Moreira, S Dellicour, ... Science 369 (6508), 1255-1260, 2020 | 63 | 2020 |
| Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ... Nature communications 11 (1), 1-11, 2020 | 40 | 2020 |
| Transmission dynamics of re-emerging rabies in domestic dogs of rural China H Tian, Y Feng, B Vrancken, B Cazelles, H Tan, MS Gill, Q Yang, Y Li, ... PLoS pathogens 14 (12), e1007392, 2018 | 39 | 2018 |
| A relaxed directional random walk model for phylogenetic trait evolution MS Gill, LS Tung Ho, G Baele, P Lemey, MA Suchard Systematic biology 66 (3), 299-319, 2017 | 34 | 2017 |
| Relax, keep walking—a practical guide to continuous phylogeographic inference with BEAST S Dellicour, MS Gill, NR Faria, A Rambaut, OG Pybus, MA Suchard, ... Molecular biology and evolution 38 (8), 3486-3493, 2021 | 31 | 2021 |
| Online Bayesian phylodynamic inference in BEAST with application to epidemic reconstruction MS Gill, P Lemey, MA Suchard, A Rambaut, G Baele Molecular biology and evolution 37 (6), 1832-1842, 2020 | 28 | 2020 |
| Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City S Dellicour, SL Hong, B Vrancken, A Chaillon, MS Gill, MT Maurano, ... PLoS pathogens 17 (5), e1009571, 2021 | 24 | 2021 |
| SARS-CoV-2 European resurgence foretold: interplay of introductions and persistence by leveraging genomic and mobility data P Lemey, N Ruktanonchai, S Hong, V Colizza, C Poletto, ... | 19 | 2021 |
| On the Use of Phylogeographic Inference to Infer the Dispersal History of Rabies Virus: A Review Study KD Nahata, N Bollen, MS Gill, M Layan, H Bourhy, S Dellicour, G Baele Viruses 13 (8), 1628, 2021 | 11 | 2021 |
| Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian phylogenetics framework G Baele, MS Gill, P Lemey, MA Suchard Wellcome Open Research 5, 2020 | 11 | 2020 |
| Markov-modulated continuous-time Markov chains to identify site-and branch-specific evolutionary variation in BEAST G Baele, MS Gill, P Bastide, P Lemey, MA Suchard Systematic biology 70 (1), 181-189, 2021 | 10 | 2021 |
| Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley S Issaka, O Traoré, RDS Longué, A Pinel-Galzi, MS Gill, S Dellicour, ... Virus Evolution 7 (2), veab072, 2021 | 9 | 2021 |
| YMrCA: Improving Y‐chromosomal ancestor time estimation for DNA kinship research S Claerhout, S Vanpaemel, MS Gill, LG Antiga, G Baele, R Decorte Human Mutation 42 (10), 1307-1320, 2021 | 5 | 2021 |
| Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data C Pacioni, RN Hall, T Strive, DSL Ramsey, MS Gill, TG Vaughan Viruses 15 (1), 21, 2022 | 3 | 2022 |
| Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ... bioRxiv, 788059, 2020 | 3 | 2020 |
