Cis-perturbation of cancer drivers by the HTLV-1/BLV proviruses is an early determinant of leukemogenesis N Rosewick, M Artesi, K Durkin, A Marçais, V Hahaut, P Griebel, N Arsic, ... Nature Communications 8, 2017 | 94 | 2017 |
Characterization of novel Bovine Leukemia Virus (BLV) antisense transcripts by deep sequencing reveals constitutive expression in tumors and transcriptional interaction with … K Durkin, N Rosewick, M Artesi, V Hahaut, P Griebel, N Arsic, A Burny, ... Retrovirology 13, 1-16, 2016 | 94 | 2016 |
Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq V Hahaut, D Pavlinic, W Carbone, S Schuierer, P Balmer, M Quinodoz, ... Nature biotechnology 40 (10), 1447-1451, 2022 | 50 | 2022 |
PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads M Artesi*, V Hahaut*, B Cole*, L Lambrechts, F Ashrafi, A Marçais, ... Genome Biology 22 (1), 1-24, 2021 | 32* | 2021 |
HTLV-1 infection promotes excessive T cell activation and transformation into adult T cell leukemia/lymphoma BJY Tan, K Sugata, O Reda, M Matsuo, K Uchiyama, P Miyazato, ... The Journal of Clinical Investigation 131 (24), 2021 | 31 | 2021 |
Targeted deep sequencing reveals clonal and subclonal mutational signatures in Adult T-cell leukemia/lymphoma and defines an unfavorable indolent subtype A Marçais, L Lhermitte, M Artesi, C Laurent, K Durkin, V Hahaut, ... Leukemia 35 (3), 764-776, 2021 | 29 | 2021 |
Monitoring molecular response in adult T-cell leukemia by high-throughput sequencing analysis of HTLV-1 clonality M Artesi, A Marçais, K Durkin, N Rosewick, V Hahaut, F Suarez, ... Leukemia 31 (11), 2532-2535, 2017 | 27 | 2017 |
PDZ domain-binding motif of Tax sustains T-cell proliferation in HTLV-1-infected humanized mice E Pérès, J Blin, EP Ricci, M Artesi, V Hahaut, A Van den Broeke, A Corbin, ... Plos Pathogens, 2018 | 26 | 2018 |
NK cells and monocytes modulate primary HTLV-1 infection R Moles, S Sarkis, V Galli, M Omsland, M Artesi, M Bissa, K McKinnon, ... PLoS Pathogens 18 (4), e1010416, 2022 | 13 | 2022 |
Full-length single-cell RNA-sequencing with FLASH-seq V Hahaut, S Picelli Single cell transcriptomics: methods and protocols, 123-164, 2022 | 8 | 2022 |
An improved sequencing-based bioinformatics pipeline to track the distribution and clonal architecture of proviral integration sites N Rosewick*, V Hahaut*, K Durkin, M Artesi, S Karpe, J Wayet, P Griebel, ... Frontiers in Microbiology 11, 2020 | 8 | 2020 |
Cell type-focused compound screen in human organoids reveals molecules and pathways controlling cone photoreceptor death SE Spirig, VJ Arteaga-Moreta, Z Raics, S Posada-Céspedes, S Chreng, ... bioRxiv, 2023.10. 09.561525, 2023 | 1 | 2023 |
Detection of elusive DNA copy-number variations in hereditary disease and cancer through the use of noncoding and off-target sequencing reads M Quinodoz, K Kaminska, F Cancellieri, JH Han, VG Peter, E Celik, ... The American Journal of Human Genetics 111 (4), 701-713, 2024 | | 2024 |
Bulk FLASH-seq V Hahaut, S Picelli, RA Siwicki | | 2023 |
Pooled Crispr Inverse PCR Sequencing (PCIP-Seq): Simultaneous Sequencing of Viral Insertion Points and the Integrated Viral Genomes with Long Reads K Durkin, M Artesi, A Van Den Broeke, V Bours, V Hahaut, M Georges US Patent App. 17/781,980, 2023 | | 2023 |
FLASH-seq protocol S Picelli, V Hahaut | | 2023 |
FLASH-seq UMI protocol S Picelli, V Hahaut | | 2022 |
FLASH-seq Low-Amplification protocol S Picelli, V Hahaut | | 2022 |
Fast, Miniaturized and Automated Library Prep for High-quality Single-cell RNA-seq Data V Hahaut, D Pavlinic, S Picelli, E Sinkala, J Riba | | 2021 |
Monitoring method for adult t-cell leukemia/lymphoma (atl) M Georges, A Van Den Broeke, K Durkin, M Artesi, V Hahaut, N Rosewick US Patent App. 16/500,910, 2020 | | 2020 |